Protein–RNA interactions for Protein: Q8BKA3

Srrm4, Serine/arginine repetitive matrix protein 4, mousemouse

Predictions only

Length 608 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Srrm4Q8BKA3 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Srrm4Q8BKA3 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Srrm4Q8BKA3 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Srrm4Q8BKA3 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Srrm4Q8BKA3 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC19■□□□□ 0.63
Srrm4Q8BKA3 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC19■□□□□ 0.63
Srrm4Q8BKA3 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC19■□□□□ 0.63
Srrm4Q8BKA3 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Srrm4Q8BKA3 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
Srrm4Q8BKA3 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
Srrm4Q8BKA3 AC117769.4-201ENSMUST00000225679 685 ntBASIC18.99■□□□□ 0.63
Srrm4Q8BKA3 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Srrm4Q8BKA3 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
Srrm4Q8BKA3 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Srrm4Q8BKA3 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
Srrm4Q8BKA3 Gm7199-201ENSMUST00000118327 1485 ntBASIC18.98■□□□□ 0.63
Srrm4Q8BKA3 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Srrm4Q8BKA3 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Srrm4Q8BKA3 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC18.98■□□□□ 0.63
Srrm4Q8BKA3 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC18.98■□□□□ 0.63
Srrm4Q8BKA3 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Srrm4Q8BKA3 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Srrm4Q8BKA3 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Srrm4Q8BKA3 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Srrm4Q8BKA3 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Srrm4Q8BKA3 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
Srrm4Q8BKA3 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Srrm4Q8BKA3 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Srrm4Q8BKA3 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Srrm4Q8BKA3 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Srrm4Q8BKA3 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Srrm4Q8BKA3 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC18.96■□□□□ 0.63
Srrm4Q8BKA3 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Srrm4Q8BKA3 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
Srrm4Q8BKA3 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
Srrm4Q8BKA3 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Srrm4Q8BKA3 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Srrm4Q8BKA3 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Srrm4Q8BKA3 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
Srrm4Q8BKA3 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC18.96■□□□□ 0.63
Srrm4Q8BKA3 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Srrm4Q8BKA3 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Srrm4Q8BKA3 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
Srrm4Q8BKA3 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC18.95■□□□□ 0.62
Srrm4Q8BKA3 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Srrm4Q8BKA3 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Srrm4Q8BKA3 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC18.95■□□□□ 0.62
Srrm4Q8BKA3 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Srrm4Q8BKA3 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Srrm4Q8BKA3 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Srrm4Q8BKA3 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Srrm4Q8BKA3 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Srrm4Q8BKA3 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC18.94■□□□□ 0.62
Srrm4Q8BKA3 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC18.94■□□□□ 0.62
Srrm4Q8BKA3 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Srrm4Q8BKA3 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Srrm4Q8BKA3 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC18.93■□□□□ 0.62
Srrm4Q8BKA3 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Srrm4Q8BKA3 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Srrm4Q8BKA3 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Srrm4Q8BKA3 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Srrm4Q8BKA3 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Srrm4Q8BKA3 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Srrm4Q8BKA3 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Srrm4Q8BKA3 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Srrm4Q8BKA3 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
Srrm4Q8BKA3 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Srrm4Q8BKA3 Gm6277-202ENSMUST00000224036 2779 ntBASIC18.91■□□□□ 0.62
Srrm4Q8BKA3 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
Srrm4Q8BKA3 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
Srrm4Q8BKA3 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Srrm4Q8BKA3 Gm10420-201ENSMUST00000121713 882 ntBASIC18.9■□□□□ 0.62
Srrm4Q8BKA3 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
Srrm4Q8BKA3 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC18.9■□□□□ 0.62
Srrm4Q8BKA3 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Srrm4Q8BKA3 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Srrm4Q8BKA3 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
Srrm4Q8BKA3 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Srrm4Q8BKA3 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Srrm4Q8BKA3 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Srrm4Q8BKA3 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC18.89■□□□□ 0.61
Srrm4Q8BKA3 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Srrm4Q8BKA3 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
Srrm4Q8BKA3 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Srrm4Q8BKA3 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Srrm4Q8BKA3 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC18.89■□□□□ 0.61
Srrm4Q8BKA3 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Srrm4Q8BKA3 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC18.88■□□□□ 0.61
Srrm4Q8BKA3 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Srrm4Q8BKA3 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Srrm4Q8BKA3 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Srrm4Q8BKA3 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Srrm4Q8BKA3 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Srrm4Q8BKA3 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Srrm4Q8BKA3 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Srrm4Q8BKA3 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Srrm4Q8BKA3 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
Srrm4Q8BKA3 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Srrm4Q8BKA3 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Srrm4Q8BKA3 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 14.5 ms