Protein–RNA interactions for Protein: Q8BHK2

Scn3b, Sodium channel subunit beta-3, mousemouse

Predictions only

Length 215 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn3bQ8BHK2 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC20.37■□□□□ 0.85
Scn3bQ8BHK2 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC20.37■□□□□ 0.85
Scn3bQ8BHK2 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Scn3bQ8BHK2 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
Scn3bQ8BHK2 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Scn3bQ8BHK2 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Scn3bQ8BHK2 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC20.36■□□□□ 0.85
Scn3bQ8BHK2 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
Scn3bQ8BHK2 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Scn3bQ8BHK2 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC20.35■□□□□ 0.85
Scn3bQ8BHK2 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Scn3bQ8BHK2 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Scn3bQ8BHK2 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Scn3bQ8BHK2 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Scn3bQ8BHK2 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Scn3bQ8BHK2 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Scn3bQ8BHK2 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC20.34■□□□□ 0.85
Scn3bQ8BHK2 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC20.34■□□□□ 0.85
Scn3bQ8BHK2 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Scn3bQ8BHK2 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Scn3bQ8BHK2 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Scn3bQ8BHK2 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
Scn3bQ8BHK2 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
Scn3bQ8BHK2 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Scn3bQ8BHK2 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
Scn3bQ8BHK2 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Scn3bQ8BHK2 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
Scn3bQ8BHK2 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
Scn3bQ8BHK2 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Scn3bQ8BHK2 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Scn3bQ8BHK2 Gm32051-202ENSMUST00000197905 2385 ntBASIC20.31■□□□□ 0.84
Scn3bQ8BHK2 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Scn3bQ8BHK2 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Scn3bQ8BHK2 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
Scn3bQ8BHK2 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Scn3bQ8BHK2 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Scn3bQ8BHK2 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Scn3bQ8BHK2 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC20.3■□□□□ 0.84
Scn3bQ8BHK2 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Scn3bQ8BHK2 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
Scn3bQ8BHK2 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Scn3bQ8BHK2 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Scn3bQ8BHK2 Gm45855-201ENSMUST00000212546 880 ntBASIC20.3■□□□□ 0.84
Scn3bQ8BHK2 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Scn3bQ8BHK2 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Scn3bQ8BHK2 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC20.3■□□□□ 0.84
Scn3bQ8BHK2 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Scn3bQ8BHK2 Gm9910-201ENSMUST00000195385 1550 ntBASIC20.29■□□□□ 0.84
Scn3bQ8BHK2 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Scn3bQ8BHK2 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Scn3bQ8BHK2 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC20.29■□□□□ 0.84
Scn3bQ8BHK2 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Scn3bQ8BHK2 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Scn3bQ8BHK2 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Scn3bQ8BHK2 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Scn3bQ8BHK2 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Scn3bQ8BHK2 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Scn3bQ8BHK2 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Scn3bQ8BHK2 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
Scn3bQ8BHK2 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Scn3bQ8BHK2 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Scn3bQ8BHK2 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Scn3bQ8BHK2 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
Scn3bQ8BHK2 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Scn3bQ8BHK2 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Scn3bQ8BHK2 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Scn3bQ8BHK2 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
Scn3bQ8BHK2 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
Scn3bQ8BHK2 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Scn3bQ8BHK2 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC20.26■□□□□ 0.83
Scn3bQ8BHK2 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Scn3bQ8BHK2 Gm28731-201ENSMUST00000185564 1569 ntBASIC20.26■□□□□ 0.83
Scn3bQ8BHK2 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Scn3bQ8BHK2 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC20.26■□□□□ 0.83
Scn3bQ8BHK2 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Scn3bQ8BHK2 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Scn3bQ8BHK2 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Scn3bQ8BHK2 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Scn3bQ8BHK2 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Scn3bQ8BHK2 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Scn3bQ8BHK2 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Scn3bQ8BHK2 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Scn3bQ8BHK2 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Scn3bQ8BHK2 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Scn3bQ8BHK2 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Scn3bQ8BHK2 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Scn3bQ8BHK2 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Scn3bQ8BHK2 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Scn3bQ8BHK2 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Scn3bQ8BHK2 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Scn3bQ8BHK2 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
Scn3bQ8BHK2 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
Scn3bQ8BHK2 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC20.23■□□□□ 0.83
Scn3bQ8BHK2 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
Scn3bQ8BHK2 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Scn3bQ8BHK2 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Scn3bQ8BHK2 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
Scn3bQ8BHK2 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC20.23■□□□□ 0.83
Scn3bQ8BHK2 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
Scn3bQ8BHK2 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 11.5 ms