Protein–RNA interactions for Protein: Q8BGH2

Samm50, Sorting and assembly machinery component 50 homolog, mousemouse

Predictions only

Length 469 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Samm50Q8BGH2 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC25.58■■□□□ 1.69
Samm50Q8BGH2 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.68
Samm50Q8BGH2 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
Samm50Q8BGH2 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC25.57■■□□□ 1.68
Samm50Q8BGH2 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC25.57■■□□□ 1.68
Samm50Q8BGH2 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
Samm50Q8BGH2 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
Samm50Q8BGH2 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
Samm50Q8BGH2 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC25.57■■□□□ 1.68
Samm50Q8BGH2 Cap2-205ENSMUST00000225824 1634 ntBASIC25.56■■□□□ 1.68
Samm50Q8BGH2 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC25.56■■□□□ 1.68
Samm50Q8BGH2 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
Samm50Q8BGH2 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC25.56■■□□□ 1.68
Samm50Q8BGH2 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
Samm50Q8BGH2 Dmtn-209ENSMUST00000228295 2572 ntBASIC25.56■■□□□ 1.68
Samm50Q8BGH2 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
Samm50Q8BGH2 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC25.56■■□□□ 1.68
Samm50Q8BGH2 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC25.56■■□□□ 1.68
Samm50Q8BGH2 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC25.55■■□□□ 1.68
Samm50Q8BGH2 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC25.55■■□□□ 1.68
Samm50Q8BGH2 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
Samm50Q8BGH2 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
Samm50Q8BGH2 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC25.55■■□□□ 1.68
Samm50Q8BGH2 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
Samm50Q8BGH2 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
Samm50Q8BGH2 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
Samm50Q8BGH2 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
Samm50Q8BGH2 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC25.54■■□□□ 1.68
Samm50Q8BGH2 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
Samm50Q8BGH2 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
Samm50Q8BGH2 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC25.53■■□□□ 1.68
Samm50Q8BGH2 Gm6277-202ENSMUST00000224036 2779 ntBASIC25.52■■□□□ 1.68
Samm50Q8BGH2 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC25.52■■□□□ 1.68
Samm50Q8BGH2 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
Samm50Q8BGH2 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC25.52■■□□□ 1.68
Samm50Q8BGH2 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC25.52■■□□□ 1.68
Samm50Q8BGH2 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
Samm50Q8BGH2 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
Samm50Q8BGH2 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
Samm50Q8BGH2 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
Samm50Q8BGH2 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC25.51■■□□□ 1.67
Samm50Q8BGH2 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
Samm50Q8BGH2 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC25.5■■□□□ 1.67
Samm50Q8BGH2 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC25.5■■□□□ 1.67
Samm50Q8BGH2 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC25.5■■□□□ 1.67
Samm50Q8BGH2 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC25.5■■□□□ 1.67
Samm50Q8BGH2 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC25.5■■□□□ 1.67
Samm50Q8BGH2 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC25.5■■□□□ 1.67
Samm50Q8BGH2 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC25.49■■□□□ 1.67
Samm50Q8BGH2 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
Samm50Q8BGH2 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
Samm50Q8BGH2 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
Samm50Q8BGH2 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
Samm50Q8BGH2 Gm26766-202ENSMUST00000227544 2347 ntBASIC25.49■■□□□ 1.67
Samm50Q8BGH2 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
Samm50Q8BGH2 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC25.48■■□□□ 1.67
Samm50Q8BGH2 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC25.48■■□□□ 1.67
Samm50Q8BGH2 Gm27502-201ENSMUST00000183495 199 ntBASIC25.48■■□□□ 1.67
Samm50Q8BGH2 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC25.48■■□□□ 1.67
Samm50Q8BGH2 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
Samm50Q8BGH2 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
Samm50Q8BGH2 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC25.48■■□□□ 1.67
Samm50Q8BGH2 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC25.48■■□□□ 1.67
Samm50Q8BGH2 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC25.47■■□□□ 1.67
Samm50Q8BGH2 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
Samm50Q8BGH2 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
Samm50Q8BGH2 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
Samm50Q8BGH2 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC25.47■■□□□ 1.67
Samm50Q8BGH2 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
Samm50Q8BGH2 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC25.46■■□□□ 1.67
Samm50Q8BGH2 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC25.46■■□□□ 1.67
Samm50Q8BGH2 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
Samm50Q8BGH2 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.67
Samm50Q8BGH2 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC25.45■■□□□ 1.67
Samm50Q8BGH2 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.67
Samm50Q8BGH2 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC25.45■■□□□ 1.66
Samm50Q8BGH2 Gm12366-201ENSMUST00000121722 873 ntBASIC25.45■■□□□ 1.66
Samm50Q8BGH2 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC25.45■■□□□ 1.66
Samm50Q8BGH2 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC25.45■■□□□ 1.66
Samm50Q8BGH2 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC25.45■■□□□ 1.66
Samm50Q8BGH2 Gm5786-201ENSMUST00000085368 882 ntBASIC25.45■■□□□ 1.66
Samm50Q8BGH2 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
Samm50Q8BGH2 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC25.44■■□□□ 1.66
Samm50Q8BGH2 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC25.44■■□□□ 1.66
Samm50Q8BGH2 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
Samm50Q8BGH2 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC25.44■■□□□ 1.66
Samm50Q8BGH2 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
Samm50Q8BGH2 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC25.43■■□□□ 1.66
Samm50Q8BGH2 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC25.43■■□□□ 1.66
Samm50Q8BGH2 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC25.43■■□□□ 1.66
Samm50Q8BGH2 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
Samm50Q8BGH2 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC25.43■■□□□ 1.66
Samm50Q8BGH2 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
Samm50Q8BGH2 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
Samm50Q8BGH2 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC25.43■■□□□ 1.66
Samm50Q8BGH2 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC25.41■■□□□ 1.66
Samm50Q8BGH2 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
Samm50Q8BGH2 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC25.41■■□□□ 1.66
Samm50Q8BGH2 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC25.41■■□□□ 1.66
Samm50Q8BGH2 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC25.41■■□□□ 1.66
Retrieved 100 of 76,532 protein–RNA pairs in 16.6 ms