Protein–RNA interactions for Protein: Q811I0

Atpaf1, ATP synthase mitochondrial F1 complex assembly factor 1, mousemouse

Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atpaf1Q811I0 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Atpaf1Q811I0 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC17.95■□□□□ 0.46
Atpaf1Q811I0 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Atpaf1Q811I0 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Atpaf1Q811I0 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
Atpaf1Q811I0 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Atpaf1Q811I0 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Atpaf1Q811I0 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Atpaf1Q811I0 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Atpaf1Q811I0 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
Atpaf1Q811I0 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Atpaf1Q811I0 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Atpaf1Q811I0 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
Atpaf1Q811I0 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Atpaf1Q811I0 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
Atpaf1Q811I0 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Atpaf1Q811I0 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Atpaf1Q811I0 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Atpaf1Q811I0 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Atpaf1Q811I0 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC17.93■□□□□ 0.46
Atpaf1Q811I0 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
Atpaf1Q811I0 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC17.92■□□□□ 0.46
Atpaf1Q811I0 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Atpaf1Q811I0 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Atpaf1Q811I0 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
Atpaf1Q811I0 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Atpaf1Q811I0 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC17.91■□□□□ 0.46
Atpaf1Q811I0 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Atpaf1Q811I0 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Atpaf1Q811I0 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
Atpaf1Q811I0 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Atpaf1Q811I0 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Atpaf1Q811I0 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Atpaf1Q811I0 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Atpaf1Q811I0 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Atpaf1Q811I0 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Atpaf1Q811I0 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
Atpaf1Q811I0 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
Atpaf1Q811I0 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Atpaf1Q811I0 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
Atpaf1Q811I0 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Atpaf1Q811I0 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC17.88■□□□□ 0.45
Atpaf1Q811I0 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Atpaf1Q811I0 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Atpaf1Q811I0 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Atpaf1Q811I0 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Atpaf1Q811I0 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Atpaf1Q811I0 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Atpaf1Q811I0 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC17.87■□□□□ 0.45
Atpaf1Q811I0 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Atpaf1Q811I0 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Atpaf1Q811I0 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
Atpaf1Q811I0 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Atpaf1Q811I0 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Atpaf1Q811I0 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Atpaf1Q811I0 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Atpaf1Q811I0 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
Atpaf1Q811I0 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Atpaf1Q811I0 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
Atpaf1Q811I0 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
Atpaf1Q811I0 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Atpaf1Q811I0 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Atpaf1Q811I0 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Atpaf1Q811I0 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
Atpaf1Q811I0 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Atpaf1Q811I0 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Atpaf1Q811I0 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC17.84■□□□□ 0.45
Atpaf1Q811I0 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Atpaf1Q811I0 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
Atpaf1Q811I0 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Atpaf1Q811I0 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Atpaf1Q811I0 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC17.84■□□□□ 0.45
Atpaf1Q811I0 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Atpaf1Q811I0 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.45
Atpaf1Q811I0 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Atpaf1Q811I0 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC17.83■□□□□ 0.44
Atpaf1Q811I0 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC17.83■□□□□ 0.44
Atpaf1Q811I0 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Atpaf1Q811I0 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC17.83■□□□□ 0.44
Atpaf1Q811I0 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Atpaf1Q811I0 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Atpaf1Q811I0 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Atpaf1Q811I0 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Atpaf1Q811I0 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Atpaf1Q811I0 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Atpaf1Q811I0 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Atpaf1Q811I0 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
Atpaf1Q811I0 Gm15043-201ENSMUST00000118843 1543 ntBASIC17.82■□□□□ 0.44
Atpaf1Q811I0 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC17.82■□□□□ 0.44
Atpaf1Q811I0 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC17.82■□□□□ 0.44
Atpaf1Q811I0 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Atpaf1Q811I0 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Atpaf1Q811I0 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Atpaf1Q811I0 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
Atpaf1Q811I0 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Atpaf1Q811I0 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
Atpaf1Q811I0 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Atpaf1Q811I0 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Atpaf1Q811I0 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
Atpaf1Q811I0 Gm10616-201ENSMUST00000205285 2127 ntBASIC17.81■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 20.4 ms