Protein–RNA interactions for Protein: Q80X56

Trim69, E3 ubiquitin-protein ligase TRIM69, mousemouse

Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim69Q80X56 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.93
Trim69Q80X56 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.93
Trim69Q80X56 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.92
Trim69Q80X56 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
Trim69Q80X56 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
Trim69Q80X56 Gm15820-201ENSMUST00000201566 728 ntBASIC20.82■□□□□ 0.92
Trim69Q80X56 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
Trim69Q80X56 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC20.82■□□□□ 0.92
Trim69Q80X56 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Trim69Q80X56 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Trim69Q80X56 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Trim69Q80X56 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Trim69Q80X56 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Trim69Q80X56 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC20.81■□□□□ 0.92
Trim69Q80X56 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Trim69Q80X56 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Trim69Q80X56 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC20.8■□□□□ 0.92
Trim69Q80X56 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC20.8■□□□□ 0.92
Trim69Q80X56 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Trim69Q80X56 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Trim69Q80X56 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Trim69Q80X56 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Trim69Q80X56 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Trim69Q80X56 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC20.78■□□□□ 0.92
Trim69Q80X56 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC20.78■□□□□ 0.92
Trim69Q80X56 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Trim69Q80X56 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Trim69Q80X56 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Trim69Q80X56 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Trim69Q80X56 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
Trim69Q80X56 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC20.77■□□□□ 0.92
Trim69Q80X56 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Trim69Q80X56 AC093043.1-201ENSMUST00000226700 898 ntBASIC20.77■□□□□ 0.92
Trim69Q80X56 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Trim69Q80X56 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
Trim69Q80X56 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.91
Trim69Q80X56 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Trim69Q80X56 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Trim69Q80X56 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Trim69Q80X56 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Trim69Q80X56 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Trim69Q80X56 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
Trim69Q80X56 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Trim69Q80X56 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
Trim69Q80X56 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Trim69Q80X56 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
Trim69Q80X56 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Trim69Q80X56 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC20.74■□□□□ 0.91
Trim69Q80X56 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Trim69Q80X56 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
Trim69Q80X56 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Trim69Q80X56 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Trim69Q80X56 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC20.73■□□□□ 0.91
Trim69Q80X56 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC20.73■□□□□ 0.91
Trim69Q80X56 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Trim69Q80X56 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Trim69Q80X56 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Trim69Q80X56 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Trim69Q80X56 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Trim69Q80X56 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Trim69Q80X56 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
Trim69Q80X56 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC20.71■□□□□ 0.91
Trim69Q80X56 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Trim69Q80X56 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Trim69Q80X56 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Trim69Q80X56 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Trim69Q80X56 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Trim69Q80X56 Rps24-207ENSMUST00000224568 714 ntBASIC20.7■□□□□ 0.9
Trim69Q80X56 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Trim69Q80X56 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Trim69Q80X56 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Trim69Q80X56 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Trim69Q80X56 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Trim69Q80X56 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Trim69Q80X56 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Trim69Q80X56 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
Trim69Q80X56 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Trim69Q80X56 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Trim69Q80X56 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Trim69Q80X56 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Trim69Q80X56 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
Trim69Q80X56 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Trim69Q80X56 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC20.68■□□□□ 0.9
Trim69Q80X56 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
Trim69Q80X56 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
Trim69Q80X56 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
Trim69Q80X56 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
Trim69Q80X56 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Trim69Q80X56 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Trim69Q80X56 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Trim69Q80X56 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Trim69Q80X56 Gm42501-201ENSMUST00000200220 1026 ntBASIC20.67■□□□□ 0.9
Trim69Q80X56 Gm18755-201ENSMUST00000218030 1099 ntBASIC20.67■□□□□ 0.9
Trim69Q80X56 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC20.67■□□□□ 0.9
Trim69Q80X56 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Trim69Q80X56 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
Trim69Q80X56 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Trim69Q80X56 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Trim69Q80X56 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Trim69Q80X56 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 20.5 ms