Protein–RNA interactions for Protein: Q80VJ2

Sra1, Steroid receptor RNA activator 1, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sra1Q80VJ2 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Sra1Q80VJ2 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC21.32■■□□□ 1
Sra1Q80VJ2 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC21.32■■□□□ 1
Sra1Q80VJ2 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC21.32■■□□□ 1
Sra1Q80VJ2 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC21.32■■□□□ 1
Sra1Q80VJ2 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Sra1Q80VJ2 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC21.31■■□□□ 1
Sra1Q80VJ2 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
Sra1Q80VJ2 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
Sra1Q80VJ2 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC21.31■■□□□ 1
Sra1Q80VJ2 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Sra1Q80VJ2 Lmo3-206ENSMUST00000163024 1331 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Sra1Q80VJ2 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Sra1Q80VJ2 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Sra1Q80VJ2 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Sra1Q80VJ2 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Sra1Q80VJ2 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC21.3■■□□□ 1
Sra1Q80VJ2 Il4-203ENSMUST00000140684 530 ntTSL 2 BASIC21.3■■□□□ 1
Sra1Q80VJ2 Il4-204ENSMUST00000150568 605 ntTSL 1 (best) BASIC21.3■■□□□ 1
Sra1Q80VJ2 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC21.3■■□□□ 1
Sra1Q80VJ2 Il4-201ENSMUST00000000889 590 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Sra1Q80VJ2 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
Sra1Q80VJ2 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Sra1Q80VJ2 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
Sra1Q80VJ2 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC21.29■■□□□ 1
Sra1Q80VJ2 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
Sra1Q80VJ2 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC21.28■■□□□ 1
Sra1Q80VJ2 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC21.28■■□□□ 1
Sra1Q80VJ2 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC21.28■■□□□ 1
Sra1Q80VJ2 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
Sra1Q80VJ2 AC154532.1-201ENSMUST00000227860 965 ntBASIC21.28■■□□□ 1
Sra1Q80VJ2 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Sra1Q80VJ2 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
Sra1Q80VJ2 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC21.28■■□□□ 1
Sra1Q80VJ2 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC21.28■■□□□ 1
Sra1Q80VJ2 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC21.28■■□□□ 1
Sra1Q80VJ2 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Sra1Q80VJ2 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Sra1Q80VJ2 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Sra1Q80VJ2 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Sra1Q80VJ2 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
Sra1Q80VJ2 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
Sra1Q80VJ2 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Sra1Q80VJ2 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Sra1Q80VJ2 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC21.26■□□□□ 0.99
Sra1Q80VJ2 Gm10420-201ENSMUST00000121713 882 ntBASIC21.26■□□□□ 0.99
Sra1Q80VJ2 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC21.26■□□□□ 0.99
Sra1Q80VJ2 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC21.26■□□□□ 0.99
Sra1Q80VJ2 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Sra1Q80VJ2 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Sra1Q80VJ2 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
Sra1Q80VJ2 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
Sra1Q80VJ2 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Sra1Q80VJ2 AC153524.1-201ENSMUST00000220436 1935 ntBASIC21.25■□□□□ 0.99
Sra1Q80VJ2 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC21.25■□□□□ 0.99
Sra1Q80VJ2 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Sra1Q80VJ2 Gm6934-201ENSMUST00000194780 1905 ntBASIC21.24■□□□□ 0.99
Sra1Q80VJ2 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC21.24■□□□□ 0.99
Sra1Q80VJ2 Gm13323-201ENSMUST00000120245 1151 ntBASIC21.24■□□□□ 0.99
Sra1Q80VJ2 4930412F09Rik-201ENSMUST00000139006 1017 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Sra1Q80VJ2 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC21.23■□□□□ 0.99
Sra1Q80VJ2 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Sra1Q80VJ2 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Sra1Q80VJ2 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Sra1Q80VJ2 Gm5067-201ENSMUST00000170449 1009 ntBASIC21.22■□□□□ 0.99
Sra1Q80VJ2 CT009738.1-201ENSMUST00000219031 809 ntBASIC21.22■□□□□ 0.99
Sra1Q80VJ2 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Sra1Q80VJ2 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Sra1Q80VJ2 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
Sra1Q80VJ2 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Sra1Q80VJ2 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Sra1Q80VJ2 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
Sra1Q80VJ2 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Sra1Q80VJ2 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Sra1Q80VJ2 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Sra1Q80VJ2 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Sra1Q80VJ2 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Sra1Q80VJ2 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Sra1Q80VJ2 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
Sra1Q80VJ2 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Sra1Q80VJ2 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Sra1Q80VJ2 Gm20498-202ENSMUST00000164386 1043 ntTSL 2 BASIC21.19■□□□□ 0.98
Sra1Q80VJ2 Gm43416-201ENSMUST00000201916 1015 ntBASIC21.19■□□□□ 0.98
Sra1Q80VJ2 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
Sra1Q80VJ2 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Sra1Q80VJ2 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Sra1Q80VJ2 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Sra1Q80VJ2 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Sra1Q80VJ2 Gm28731-201ENSMUST00000185564 1569 ntBASIC21.19■□□□□ 0.98
Sra1Q80VJ2 H3f3aos-201ENSMUST00000097448 2905 ntBASIC21.18■□□□□ 0.98
Sra1Q80VJ2 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Sra1Q80VJ2 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Sra1Q80VJ2 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Sra1Q80VJ2 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Sra1Q80VJ2 Gm21156-201ENSMUST00000189693 869 ntBASIC21.17■□□□□ 0.98
Sra1Q80VJ2 Gm19087-201ENSMUST00000191430 946 ntBASIC21.17■□□□□ 0.98
Sra1Q80VJ2 Gm43930-201ENSMUST00000203868 845 ntBASIC21.17■□□□□ 0.98
Sra1Q80VJ2 Gm32390-201ENSMUST00000212713 1172 ntBASIC21.17■□□□□ 0.98
Sra1Q80VJ2 Isg20-201ENSMUST00000038142 1083 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Sra1Q80VJ2 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Retrieved 100 of 76,532 protein–RNA pairs in 15.2 ms