Protein–RNA interactions for Protein: Q80TF3

Pcdh19, Protocadherin-19, mousemouse

Predictions only

Length 1,145 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh19Q80TF3 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC21.56■■□□□ 1.04
Pcdh19Q80TF3 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Pcdh19Q80TF3 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Pcdh19Q80TF3 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Pcdh19Q80TF3 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Pcdh19Q80TF3 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
Pcdh19Q80TF3 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC21.55■■□□□ 1.04
Pcdh19Q80TF3 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Pcdh19Q80TF3 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Pcdh19Q80TF3 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
Pcdh19Q80TF3 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC21.54■■□□□ 1.04
Pcdh19Q80TF3 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Pcdh19Q80TF3 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC21.54■■□□□ 1.04
Pcdh19Q80TF3 Gm15546-201ENSMUST00000122095 826 ntBASIC21.54■■□□□ 1.04
Pcdh19Q80TF3 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC21.54■■□□□ 1.04
Pcdh19Q80TF3 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC21.54■■□□□ 1.04
Pcdh19Q80TF3 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Pcdh19Q80TF3 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Pcdh19Q80TF3 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Pcdh19Q80TF3 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC21.54■■□□□ 1.04
Pcdh19Q80TF3 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Pcdh19Q80TF3 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
Pcdh19Q80TF3 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC21.53■■□□□ 1.04
Pcdh19Q80TF3 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC21.52■■□□□ 1.04
Pcdh19Q80TF3 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Pcdh19Q80TF3 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC21.52■■□□□ 1.04
Pcdh19Q80TF3 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Pcdh19Q80TF3 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC21.52■■□□□ 1.04
Pcdh19Q80TF3 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
Pcdh19Q80TF3 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC21.52■■□□□ 1.03
Pcdh19Q80TF3 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Pcdh19Q80TF3 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Pcdh19Q80TF3 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC21.5■■□□□ 1.03
Pcdh19Q80TF3 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC21.5■■□□□ 1.03
Pcdh19Q80TF3 Gm5522-201ENSMUST00000189483 1242 ntBASIC21.5■■□□□ 1.03
Pcdh19Q80TF3 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC21.5■■□□□ 1.03
Pcdh19Q80TF3 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC21.5■■□□□ 1.03
Pcdh19Q80TF3 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Pcdh19Q80TF3 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Pcdh19Q80TF3 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Pcdh19Q80TF3 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Pcdh19Q80TF3 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
Pcdh19Q80TF3 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Pcdh19Q80TF3 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC21.48■■□□□ 1.03
Pcdh19Q80TF3 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC21.48■■□□□ 1.03
Pcdh19Q80TF3 Gm13238-201ENSMUST00000117655 780 ntBASIC21.48■■□□□ 1.03
Pcdh19Q80TF3 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Pcdh19Q80TF3 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC21.48■■□□□ 1.03
Pcdh19Q80TF3 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
Pcdh19Q80TF3 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC21.47■■□□□ 1.03
Pcdh19Q80TF3 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC21.47■■□□□ 1.03
Pcdh19Q80TF3 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC21.46■■□□□ 1.03
Pcdh19Q80TF3 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Pcdh19Q80TF3 AC153524.1-201ENSMUST00000220436 1935 ntBASIC21.46■■□□□ 1.03
Pcdh19Q80TF3 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
Pcdh19Q80TF3 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Pcdh19Q80TF3 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Pcdh19Q80TF3 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Pcdh19Q80TF3 Gm15820-201ENSMUST00000201566 728 ntBASIC21.45■■□□□ 1.02
Pcdh19Q80TF3 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC21.45■■□□□ 1.02
Pcdh19Q80TF3 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Pcdh19Q80TF3 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC21.45■■□□□ 1.02
Pcdh19Q80TF3 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Pcdh19Q80TF3 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC21.45■■□□□ 1.02
Pcdh19Q80TF3 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC21.45■■□□□ 1.02
Pcdh19Q80TF3 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC21.44■■□□□ 1.02
Pcdh19Q80TF3 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Pcdh19Q80TF3 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Pcdh19Q80TF3 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Pcdh19Q80TF3 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Pcdh19Q80TF3 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Pcdh19Q80TF3 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Pcdh19Q80TF3 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC21.43■■□□□ 1.02
Pcdh19Q80TF3 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Pcdh19Q80TF3 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Pcdh19Q80TF3 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Pcdh19Q80TF3 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC21.42■■□□□ 1.02
Pcdh19Q80TF3 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC21.42■■□□□ 1.02
Pcdh19Q80TF3 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Pcdh19Q80TF3 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC21.42■■□□□ 1.02
Pcdh19Q80TF3 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC21.42■■□□□ 1.02
Pcdh19Q80TF3 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC21.41■■□□□ 1.02
Pcdh19Q80TF3 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC21.41■■□□□ 1.02
Pcdh19Q80TF3 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Pcdh19Q80TF3 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Pcdh19Q80TF3 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Pcdh19Q80TF3 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
Pcdh19Q80TF3 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Pcdh19Q80TF3 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC21.4■■□□□ 1.02
Pcdh19Q80TF3 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC21.4■■□□□ 1.02
Pcdh19Q80TF3 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC21.4■■□□□ 1.02
Pcdh19Q80TF3 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Pcdh19Q80TF3 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Pcdh19Q80TF3 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC21.4■■□□□ 1.02
Pcdh19Q80TF3 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC21.4■■□□□ 1.02
Pcdh19Q80TF3 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC21.39■■□□□ 1.02
Pcdh19Q80TF3 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC21.39■■□□□ 1.01
Pcdh19Q80TF3 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Pcdh19Q80TF3 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC21.38■■□□□ 1.01
Pcdh19Q80TF3 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Retrieved 100 of 76,532 protein–RNA pairs in 38.2 ms