Protein–RNA interactions for Protein: Q80TE0

Rpap1, RNA polymerase II-associated protein 1, mousemouse

Predictions only

Length 1,409 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpap1Q80TE0 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC34.99■■■■□ 3.19
Rpap1Q80TE0 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC34.98■■■■□ 3.19
Rpap1Q80TE0 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC34.98■■■■□ 3.19
Rpap1Q80TE0 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC34.98■■■■□ 3.19
Rpap1Q80TE0 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC34.98■■■■□ 3.19
Rpap1Q80TE0 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC34.98■■■■□ 3.19
Rpap1Q80TE0 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC34.97■■■■□ 3.19
Rpap1Q80TE0 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC34.97■■■■□ 3.19
Rpap1Q80TE0 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC34.97■■■■□ 3.19
Rpap1Q80TE0 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC34.96■■■■□ 3.19
Rpap1Q80TE0 AC122428.3-201ENSMUST00000215551 2290 ntBASIC34.95■■■■□ 3.19
Rpap1Q80TE0 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC34.95■■■■□ 3.19
Rpap1Q80TE0 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC34.95■■■■□ 3.19
Rpap1Q80TE0 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC34.94■■■■□ 3.18
Rpap1Q80TE0 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC34.93■■■■□ 3.18
Rpap1Q80TE0 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC34.93■■■■□ 3.18
Rpap1Q80TE0 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC34.93■■■■□ 3.18
Rpap1Q80TE0 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC34.93■■■■□ 3.18
Rpap1Q80TE0 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC34.92■■■■□ 3.18
Rpap1Q80TE0 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC34.92■■■■□ 3.18
Rpap1Q80TE0 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC34.91■■■■□ 3.18
Rpap1Q80TE0 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC34.9■■■■□ 3.18
Rpap1Q80TE0 Gm21956-201ENSMUST00000179946 522 ntBASIC34.89■■■■□ 3.18
Rpap1Q80TE0 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC34.88■■■■□ 3.17
Rpap1Q80TE0 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC34.88■■■■□ 3.17
Rpap1Q80TE0 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC34.88■■■■□ 3.17
Rpap1Q80TE0 Gm7417-201ENSMUST00000192950 473 ntBASIC34.88■■■■□ 3.17
Rpap1Q80TE0 Gm13241-201ENSMUST00000094493 780 ntBASIC34.88■■■■□ 3.17
Rpap1Q80TE0 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC34.87■■■■□ 3.17
Rpap1Q80TE0 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC34.87■■■■□ 3.17
Rpap1Q80TE0 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC34.86■■■■□ 3.17
Rpap1Q80TE0 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC34.86■■■■□ 3.17
Rpap1Q80TE0 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC34.85■■■■□ 3.17
Rpap1Q80TE0 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC34.84■■■■□ 3.17
Rpap1Q80TE0 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC34.84■■■■□ 3.17
Rpap1Q80TE0 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC34.84■■■■□ 3.17
Rpap1Q80TE0 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC34.83■■■■□ 3.17
Rpap1Q80TE0 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC34.83■■■■□ 3.17
Rpap1Q80TE0 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC34.83■■■■□ 3.17
Rpap1Q80TE0 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC34.82■■■■□ 3.17
Rpap1Q80TE0 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC34.82■■■■□ 3.17
Rpap1Q80TE0 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC34.82■■■■□ 3.17
Rpap1Q80TE0 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC34.82■■■■□ 3.16
Rpap1Q80TE0 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC34.82■■■■□ 3.16
Rpap1Q80TE0 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC34.82■■■■□ 3.16
Rpap1Q80TE0 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC34.82■■■■□ 3.16
Rpap1Q80TE0 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC34.81■■■■□ 3.16
Rpap1Q80TE0 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC34.81■■■■□ 3.16
Rpap1Q80TE0 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC34.81■■■■□ 3.16
Rpap1Q80TE0 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC34.81■■■■□ 3.16
Rpap1Q80TE0 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC34.81■■■■□ 3.16
Rpap1Q80TE0 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC34.8■■■■□ 3.16
Rpap1Q80TE0 Gm43034-201ENSMUST00000198678 1364 ntBASIC34.79■■■■□ 3.16
Rpap1Q80TE0 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC34.79■■■■□ 3.16
Rpap1Q80TE0 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC34.78■■■■□ 3.16
Rpap1Q80TE0 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC34.78■■■■□ 3.16
Rpap1Q80TE0 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC34.78■■■■□ 3.16
Rpap1Q80TE0 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC34.78■■■■□ 3.16
Rpap1Q80TE0 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC34.78■■■■□ 3.16
Rpap1Q80TE0 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC34.77■■■■□ 3.16
Rpap1Q80TE0 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC34.76■■■■□ 3.16
Rpap1Q80TE0 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC34.75■■■■□ 3.15
Rpap1Q80TE0 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC34.75■■■■□ 3.15
Rpap1Q80TE0 Gm22238-201ENSMUST00000175222 88 ntBASIC34.75■■■■□ 3.15
Rpap1Q80TE0 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC34.75■■■■□ 3.15
Rpap1Q80TE0 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC34.75■■■■□ 3.15
Rpap1Q80TE0 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC34.75■■■■□ 3.15
Rpap1Q80TE0 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC34.74■■■■□ 3.15
Rpap1Q80TE0 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC34.74■■■■□ 3.15
Rpap1Q80TE0 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC34.74■■■■□ 3.15
Rpap1Q80TE0 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC34.73■■■■□ 3.15
Rpap1Q80TE0 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC34.73■■■■□ 3.15
Rpap1Q80TE0 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC34.73■■■■□ 3.15
Rpap1Q80TE0 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC34.72■■■■□ 3.15
Rpap1Q80TE0 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC34.72■■■■□ 3.15
Rpap1Q80TE0 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC34.72■■■■□ 3.15
Rpap1Q80TE0 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC34.72■■■■□ 3.15
Rpap1Q80TE0 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC34.72■■■■□ 3.15
Rpap1Q80TE0 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC34.71■■■■□ 3.15
Rpap1Q80TE0 Gm9847-201ENSMUST00000052528 599 ntBASIC34.71■■■■□ 3.15
Rpap1Q80TE0 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC34.7■■■■□ 3.15
Rpap1Q80TE0 Nsd1-206ENSMUST00000224918 1001 ntBASIC34.7■■■■□ 3.15
Rpap1Q80TE0 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC34.69■■■■□ 3.14
Rpap1Q80TE0 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC34.69■■■■□ 3.14
Rpap1Q80TE0 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC34.69■■■■□ 3.14
Rpap1Q80TE0 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC34.69■■■■□ 3.14
Rpap1Q80TE0 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC34.68■■■■□ 3.14
Rpap1Q80TE0 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC34.68■■■■□ 3.14
Rpap1Q80TE0 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC34.68■■■■□ 3.14
Rpap1Q80TE0 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC34.68■■■■□ 3.14
Rpap1Q80TE0 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC34.67■■■■□ 3.14
Rpap1Q80TE0 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC34.67■■■■□ 3.14
Rpap1Q80TE0 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC34.67■■■■□ 3.14
Rpap1Q80TE0 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC34.67■■■■□ 3.14
Rpap1Q80TE0 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC34.66■■■■□ 3.14
Rpap1Q80TE0 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC34.66■■■■□ 3.14
Rpap1Q80TE0 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC34.66■■■■□ 3.14
Rpap1Q80TE0 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC34.66■■■■□ 3.14
Rpap1Q80TE0 Serp2-204ENSMUST00000228055 705 ntBASIC34.66■■■■□ 3.14
Rpap1Q80TE0 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC34.65■■■■□ 3.14
Retrieved 100 of 76,532 protein–RNA pairs in 42.4 ms