Protein–RNA interactions for Protein: Q7TN37

Trpm4, Transient receptor potential cation channel subfamily M member 4, mousemouse

Predictions only

Length 1,213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trpm4Q7TN37 Gm22567-201ENSMUST00000175542 342 ntBASIC22.31■■□□□ 1.16
Trpm4Q7TN37 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Trpm4Q7TN37 Gm6934-201ENSMUST00000194780 1905 ntBASIC22.31■■□□□ 1.16
Trpm4Q7TN37 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
Trpm4Q7TN37 Gm14523-201ENSMUST00000117260 558 ntBASIC22.3■■□□□ 1.16
Trpm4Q7TN37 Gm45364-201ENSMUST00000210883 159 ntBASIC22.3■■□□□ 1.16
Trpm4Q7TN37 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Trpm4Q7TN37 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC22.3■■□□□ 1.16
Trpm4Q7TN37 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Trpm4Q7TN37 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Trpm4Q7TN37 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Trpm4Q7TN37 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Trpm4Q7TN37 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC22.3■■□□□ 1.16
Trpm4Q7TN37 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Trpm4Q7TN37 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC22.29■■□□□ 1.16
Trpm4Q7TN37 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Trpm4Q7TN37 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Trpm4Q7TN37 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Trpm4Q7TN37 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Trpm4Q7TN37 Gm5067-201ENSMUST00000170449 1009 ntBASIC22.28■■□□□ 1.16
Trpm4Q7TN37 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC22.28■■□□□ 1.16
Trpm4Q7TN37 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Trpm4Q7TN37 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
Trpm4Q7TN37 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Trpm4Q7TN37 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
Trpm4Q7TN37 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Trpm4Q7TN37 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC22.27■■□□□ 1.16
Trpm4Q7TN37 Gm5812-201ENSMUST00000061073 957 ntBASIC22.27■■□□□ 1.16
Trpm4Q7TN37 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC22.27■■□□□ 1.16
Trpm4Q7TN37 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC22.27■■□□□ 1.16
Trpm4Q7TN37 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC22.27■■□□□ 1.15
Trpm4Q7TN37 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.15
Trpm4Q7TN37 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.15
Trpm4Q7TN37 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC22.26■■□□□ 1.15
Trpm4Q7TN37 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Trpm4Q7TN37 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC22.26■■□□□ 1.15
Trpm4Q7TN37 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Trpm4Q7TN37 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC22.25■■□□□ 1.15
Trpm4Q7TN37 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Trpm4Q7TN37 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC22.25■■□□□ 1.15
Trpm4Q7TN37 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC22.25■■□□□ 1.15
Trpm4Q7TN37 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
Trpm4Q7TN37 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC22.25■■□□□ 1.15
Trpm4Q7TN37 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
Trpm4Q7TN37 Dmtn-209ENSMUST00000228295 2572 ntBASIC22.25■■□□□ 1.15
Trpm4Q7TN37 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC22.24■■□□□ 1.15
Trpm4Q7TN37 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Trpm4Q7TN37 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC22.24■■□□□ 1.15
Trpm4Q7TN37 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC22.24■■□□□ 1.15
Trpm4Q7TN37 Gm13889-201ENSMUST00000099689 1386 ntBASIC22.24■■□□□ 1.15
Trpm4Q7TN37 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Trpm4Q7TN37 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC22.23■■□□□ 1.15
Trpm4Q7TN37 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC22.22■■□□□ 1.15
Trpm4Q7TN37 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Trpm4Q7TN37 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC22.22■■□□□ 1.15
Trpm4Q7TN37 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC22.22■■□□□ 1.15
Trpm4Q7TN37 Gm12818-201ENSMUST00000117562 1349 ntBASIC22.22■■□□□ 1.15
Trpm4Q7TN37 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Trpm4Q7TN37 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
Trpm4Q7TN37 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
Trpm4Q7TN37 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC22.21■■□□□ 1.15
Trpm4Q7TN37 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC22.21■■□□□ 1.15
Trpm4Q7TN37 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Trpm4Q7TN37 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
Trpm4Q7TN37 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC22.2■■□□□ 1.14
Trpm4Q7TN37 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC22.2■■□□□ 1.14
Trpm4Q7TN37 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Trpm4Q7TN37 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC22.2■■□□□ 1.14
Trpm4Q7TN37 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC22.2■■□□□ 1.14
Trpm4Q7TN37 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Trpm4Q7TN37 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC22.2■■□□□ 1.14
Trpm4Q7TN37 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC22.19■■□□□ 1.14
Trpm4Q7TN37 Gm26766-202ENSMUST00000227544 2347 ntBASIC22.19■■□□□ 1.14
Trpm4Q7TN37 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC22.19■■□□□ 1.14
Trpm4Q7TN37 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC22.19■■□□□ 1.14
Trpm4Q7TN37 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
Trpm4Q7TN37 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC22.18■■□□□ 1.14
Trpm4Q7TN37 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Trpm4Q7TN37 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC22.18■■□□□ 1.14
Trpm4Q7TN37 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC22.18■■□□□ 1.14
Trpm4Q7TN37 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC22.18■■□□□ 1.14
Trpm4Q7TN37 Gm6277-202ENSMUST00000224036 2779 ntBASIC22.18■■□□□ 1.14
Trpm4Q7TN37 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Trpm4Q7TN37 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC22.18■■□□□ 1.14
Trpm4Q7TN37 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Trpm4Q7TN37 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC22.16■■□□□ 1.14
Trpm4Q7TN37 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
Trpm4Q7TN37 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Trpm4Q7TN37 Gm5921-201ENSMUST00000075898 882 ntBASIC22.16■■□□□ 1.14
Trpm4Q7TN37 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Trpm4Q7TN37 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC22.16■■□□□ 1.14
Trpm4Q7TN37 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Trpm4Q7TN37 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
Trpm4Q7TN37 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC22.15■■□□□ 1.14
Trpm4Q7TN37 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Trpm4Q7TN37 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC22.14■■□□□ 1.14
Trpm4Q7TN37 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
Trpm4Q7TN37 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
Trpm4Q7TN37 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
Trpm4Q7TN37 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
Retrieved 100 of 76,532 protein–RNA pairs in 56.1 ms