Protein–RNA interactions for Protein: Q6U7R4

Timd4, T-cell immunoglobulin and mucin domain-containing protein 4, mousemouse

Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Timd4Q6U7R4 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Timd4Q6U7R4 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Timd4Q6U7R4 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
Timd4Q6U7R4 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Timd4Q6U7R4 Gm22567-201ENSMUST00000175542 342 ntBASIC20.42■□□□□ 0.86
Timd4Q6U7R4 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
Timd4Q6U7R4 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Timd4Q6U7R4 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Timd4Q6U7R4 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Timd4Q6U7R4 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Timd4Q6U7R4 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
Timd4Q6U7R4 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Timd4Q6U7R4 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Timd4Q6U7R4 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Timd4Q6U7R4 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC20.4■□□□□ 0.86
Timd4Q6U7R4 AC153524.1-201ENSMUST00000220436 1935 ntBASIC20.4■□□□□ 0.86
Timd4Q6U7R4 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Timd4Q6U7R4 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Timd4Q6U7R4 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.86
Timd4Q6U7R4 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Timd4Q6U7R4 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC20.39■□□□□ 0.85
Timd4Q6U7R4 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Timd4Q6U7R4 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC20.39■□□□□ 0.85
Timd4Q6U7R4 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC20.39■□□□□ 0.85
Timd4Q6U7R4 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Timd4Q6U7R4 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Timd4Q6U7R4 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC20.38■□□□□ 0.85
Timd4Q6U7R4 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Timd4Q6U7R4 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Timd4Q6U7R4 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Timd4Q6U7R4 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Timd4Q6U7R4 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Timd4Q6U7R4 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC20.36■□□□□ 0.85
Timd4Q6U7R4 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC20.36■□□□□ 0.85
Timd4Q6U7R4 Gm10420-201ENSMUST00000121713 882 ntBASIC20.36■□□□□ 0.85
Timd4Q6U7R4 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
Timd4Q6U7R4 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Timd4Q6U7R4 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC20.36■□□□□ 0.85
Timd4Q6U7R4 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
Timd4Q6U7R4 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Timd4Q6U7R4 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Timd4Q6U7R4 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC20.35■□□□□ 0.85
Timd4Q6U7R4 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Timd4Q6U7R4 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
Timd4Q6U7R4 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
Timd4Q6U7R4 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Timd4Q6U7R4 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC20.35■□□□□ 0.85
Timd4Q6U7R4 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC20.35■□□□□ 0.85
Timd4Q6U7R4 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Timd4Q6U7R4 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Timd4Q6U7R4 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
Timd4Q6U7R4 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
Timd4Q6U7R4 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Timd4Q6U7R4 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Timd4Q6U7R4 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
Timd4Q6U7R4 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Timd4Q6U7R4 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Timd4Q6U7R4 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Timd4Q6U7R4 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
Timd4Q6U7R4 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC20.32■□□□□ 0.84
Timd4Q6U7R4 H3f3aos-201ENSMUST00000097448 2905 ntBASIC20.32■□□□□ 0.84
Timd4Q6U7R4 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Timd4Q6U7R4 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Timd4Q6U7R4 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Timd4Q6U7R4 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
Timd4Q6U7R4 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Timd4Q6U7R4 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Timd4Q6U7R4 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
Timd4Q6U7R4 Gm5067-201ENSMUST00000170449 1009 ntBASIC20.31■□□□□ 0.84
Timd4Q6U7R4 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Timd4Q6U7R4 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Timd4Q6U7R4 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
Timd4Q6U7R4 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Timd4Q6U7R4 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
Timd4Q6U7R4 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Timd4Q6U7R4 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Timd4Q6U7R4 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
Timd4Q6U7R4 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Timd4Q6U7R4 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
Timd4Q6U7R4 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Timd4Q6U7R4 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Timd4Q6U7R4 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Timd4Q6U7R4 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
Timd4Q6U7R4 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Timd4Q6U7R4 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Timd4Q6U7R4 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Timd4Q6U7R4 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Timd4Q6U7R4 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Timd4Q6U7R4 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Timd4Q6U7R4 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC20.28■□□□□ 0.84
Timd4Q6U7R4 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Timd4Q6U7R4 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Timd4Q6U7R4 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Timd4Q6U7R4 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
Timd4Q6U7R4 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Timd4Q6U7R4 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC20.27■□□□□ 0.84
Timd4Q6U7R4 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Timd4Q6U7R4 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC20.27■□□□□ 0.84
Timd4Q6U7R4 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Timd4Q6U7R4 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 19.2 ms