Protein–RNA interactions for Protein: Q6PR54

Rif1, Telomere-associated protein RIF1, mousemouse

Known RBP Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rif1Q6PR54 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC18.98■□□□□ 0.63
Rif1Q6PR54 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Rif1Q6PR54 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Rif1Q6PR54 Gm22325-201ENSMUST00000158904 308 ntBASIC18.98■□□□□ 0.63
Rif1Q6PR54 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC18.98■□□□□ 0.63
Rif1Q6PR54 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC18.97■□□□□ 0.63
Rif1Q6PR54 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC18.97■□□□□ 0.63
Rif1Q6PR54 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC18.97■□□□□ 0.63
Rif1Q6PR54 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC18.97■□□□□ 0.63
Rif1Q6PR54 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC18.97■□□□□ 0.63
Rif1Q6PR54 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC18.96■□□□□ 0.63
Rif1Q6PR54 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Rif1Q6PR54 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Rif1Q6PR54 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Rif1Q6PR54 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC18.95■□□□□ 0.62
Rif1Q6PR54 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC18.95■□□□□ 0.62
Rif1Q6PR54 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Rif1Q6PR54 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Rif1Q6PR54 Gm10849-201ENSMUST00000100397 618 ntBASIC18.95■□□□□ 0.62
Rif1Q6PR54 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
Rif1Q6PR54 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Rif1Q6PR54 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Rif1Q6PR54 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Rif1Q6PR54 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Rif1Q6PR54 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC18.94■□□□□ 0.62
Rif1Q6PR54 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
Rif1Q6PR54 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Rif1Q6PR54 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Rif1Q6PR54 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Rif1Q6PR54 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Rif1Q6PR54 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Rif1Q6PR54 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Rif1Q6PR54 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC18.93■□□□□ 0.62
Rif1Q6PR54 CT025689.6-201ENSMUST00000224991 1104 ntBASIC18.93■□□□□ 0.62
Rif1Q6PR54 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Rif1Q6PR54 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Rif1Q6PR54 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Rif1Q6PR54 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Rif1Q6PR54 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Rif1Q6PR54 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Rif1Q6PR54 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
Rif1Q6PR54 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Rif1Q6PR54 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Rif1Q6PR54 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Rif1Q6PR54 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Rif1Q6PR54 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC18.91■□□□□ 0.62
Rif1Q6PR54 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
Rif1Q6PR54 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
Rif1Q6PR54 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Rif1Q6PR54 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Rif1Q6PR54 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Rif1Q6PR54 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
Rif1Q6PR54 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC18.91■□□□□ 0.62
Rif1Q6PR54 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Rif1Q6PR54 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC18.9■□□□□ 0.62
Rif1Q6PR54 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Rif1Q6PR54 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Rif1Q6PR54 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Rif1Q6PR54 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Rif1Q6PR54 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Rif1Q6PR54 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Rif1Q6PR54 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.62
Rif1Q6PR54 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Rif1Q6PR54 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
Rif1Q6PR54 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Rif1Q6PR54 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC18.89■□□□□ 0.61
Rif1Q6PR54 Gm12669-201ENSMUST00000122162 1009 ntBASIC18.89■□□□□ 0.61
Rif1Q6PR54 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Rif1Q6PR54 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Rif1Q6PR54 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Rif1Q6PR54 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Rif1Q6PR54 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Rif1Q6PR54 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC18.88■□□□□ 0.61
Rif1Q6PR54 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Rif1Q6PR54 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC18.88■□□□□ 0.61
Rif1Q6PR54 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Rif1Q6PR54 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC18.87■□□□□ 0.61
Rif1Q6PR54 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Rif1Q6PR54 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Rif1Q6PR54 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC18.86■□□□□ 0.61
Rif1Q6PR54 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Rif1Q6PR54 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC18.86■□□□□ 0.61
Rif1Q6PR54 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Rif1Q6PR54 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Rif1Q6PR54 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Rif1Q6PR54 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Rif1Q6PR54 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Rif1Q6PR54 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Rif1Q6PR54 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Rif1Q6PR54 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Rif1Q6PR54 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC18.85■□□□□ 0.61
Rif1Q6PR54 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC18.84■□□□□ 0.61
Rif1Q6PR54 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Rif1Q6PR54 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC18.84■□□□□ 0.61
Rif1Q6PR54 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC18.84■□□□□ 0.61
Rif1Q6PR54 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC18.84■□□□□ 0.61
Rif1Q6PR54 Gm40881-201ENSMUST00000223397 166 ntBASIC18.84■□□□□ 0.61
Rif1Q6PR54 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Rif1Q6PR54 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Rif1Q6PR54 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 20.2 ms