Protein–RNA interactions for Protein: Q6NXM2

Rcbtb1, RCC1 and BTB domain-containing protein 1, mousemouse

Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rcbtb1Q6NXM2 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Rcbtb1Q6NXM2 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Rcbtb1Q6NXM2 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Rcbtb1Q6NXM2 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
Rcbtb1Q6NXM2 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Rcbtb1Q6NXM2 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Rcbtb1Q6NXM2 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC21.18■□□□□ 0.98
Rcbtb1Q6NXM2 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Rcbtb1Q6NXM2 Gm5921-201ENSMUST00000075898 882 ntBASIC21.18■□□□□ 0.98
Rcbtb1Q6NXM2 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC21.18■□□□□ 0.98
Rcbtb1Q6NXM2 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Rcbtb1Q6NXM2 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Rcbtb1Q6NXM2 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Rcbtb1Q6NXM2 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC21.17■□□□□ 0.98
Rcbtb1Q6NXM2 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
Rcbtb1Q6NXM2 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
Rcbtb1Q6NXM2 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Rcbtb1Q6NXM2 Gm6934-201ENSMUST00000194780 1905 ntBASIC21.17■□□□□ 0.98
Rcbtb1Q6NXM2 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Rcbtb1Q6NXM2 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
Rcbtb1Q6NXM2 AC153524.1-201ENSMUST00000220436 1935 ntBASIC21.16■□□□□ 0.98
Rcbtb1Q6NXM2 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Rcbtb1Q6NXM2 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Rcbtb1Q6NXM2 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
Rcbtb1Q6NXM2 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
Rcbtb1Q6NXM2 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Rcbtb1Q6NXM2 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC21.15■□□□□ 0.98
Rcbtb1Q6NXM2 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Rcbtb1Q6NXM2 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Rcbtb1Q6NXM2 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Rcbtb1Q6NXM2 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC21.14■□□□□ 0.97
Rcbtb1Q6NXM2 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Rcbtb1Q6NXM2 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Rcbtb1Q6NXM2 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC21.14■□□□□ 0.97
Rcbtb1Q6NXM2 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.97
Rcbtb1Q6NXM2 Gm28731-201ENSMUST00000185564 1569 ntBASIC21.14■□□□□ 0.97
Rcbtb1Q6NXM2 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Rcbtb1Q6NXM2 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Rcbtb1Q6NXM2 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Rcbtb1Q6NXM2 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Rcbtb1Q6NXM2 Gm5812-201ENSMUST00000061073 957 ntBASIC21.13■□□□□ 0.97
Rcbtb1Q6NXM2 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Rcbtb1Q6NXM2 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Rcbtb1Q6NXM2 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Rcbtb1Q6NXM2 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Rcbtb1Q6NXM2 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Rcbtb1Q6NXM2 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Rcbtb1Q6NXM2 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Rcbtb1Q6NXM2 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Rcbtb1Q6NXM2 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Rcbtb1Q6NXM2 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Rcbtb1Q6NXM2 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Rcbtb1Q6NXM2 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC21.11■□□□□ 0.97
Rcbtb1Q6NXM2 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Rcbtb1Q6NXM2 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Rcbtb1Q6NXM2 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
Rcbtb1Q6NXM2 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Rcbtb1Q6NXM2 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Rcbtb1Q6NXM2 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Rcbtb1Q6NXM2 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Rcbtb1Q6NXM2 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
Rcbtb1Q6NXM2 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Rcbtb1Q6NXM2 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Rcbtb1Q6NXM2 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Rcbtb1Q6NXM2 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Rcbtb1Q6NXM2 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Rcbtb1Q6NXM2 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC21.08■□□□□ 0.97
Rcbtb1Q6NXM2 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC21.08■□□□□ 0.97
Rcbtb1Q6NXM2 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
Rcbtb1Q6NXM2 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Rcbtb1Q6NXM2 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Rcbtb1Q6NXM2 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Rcbtb1Q6NXM2 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Rcbtb1Q6NXM2 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
Rcbtb1Q6NXM2 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Rcbtb1Q6NXM2 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Rcbtb1Q6NXM2 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Rcbtb1Q6NXM2 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Rcbtb1Q6NXM2 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Rcbtb1Q6NXM2 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC21.06■□□□□ 0.96
Rcbtb1Q6NXM2 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC21.06■□□□□ 0.96
Rcbtb1Q6NXM2 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Rcbtb1Q6NXM2 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Rcbtb1Q6NXM2 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Rcbtb1Q6NXM2 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Rcbtb1Q6NXM2 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Rcbtb1Q6NXM2 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
Rcbtb1Q6NXM2 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Rcbtb1Q6NXM2 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Rcbtb1Q6NXM2 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
Rcbtb1Q6NXM2 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Rcbtb1Q6NXM2 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Rcbtb1Q6NXM2 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Rcbtb1Q6NXM2 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
Rcbtb1Q6NXM2 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
Rcbtb1Q6NXM2 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Rcbtb1Q6NXM2 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC21.03■□□□□ 0.96
Rcbtb1Q6NXM2 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Rcbtb1Q6NXM2 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Rcbtb1Q6NXM2 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Retrieved 100 of 76,532 protein–RNA pairs in 19.7 ms