Protein–RNA interactions for Protein: Q64729

Tgfbr1, TGF-beta receptor type-1, mousemouse

Predictions only

Length 503 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tgfbr1Q64729 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC17.8■□□□□ 0.44
Tgfbr1Q64729 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Tgfbr1Q64729 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Tgfbr1Q64729 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Tgfbr1Q64729 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Tgfbr1Q64729 Gm13042-201ENSMUST00000119244 1955 ntBASIC17.79■□□□□ 0.44
Tgfbr1Q64729 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
Tgfbr1Q64729 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
Tgfbr1Q64729 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Tgfbr1Q64729 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Tgfbr1Q64729 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC17.79■□□□□ 0.44
Tgfbr1Q64729 Gm38160-201ENSMUST00000193090 2499 ntBASIC17.79■□□□□ 0.44
Tgfbr1Q64729 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Tgfbr1Q64729 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Tgfbr1Q64729 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Tgfbr1Q64729 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
Tgfbr1Q64729 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Tgfbr1Q64729 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Tgfbr1Q64729 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Tgfbr1Q64729 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC17.78■□□□□ 0.44
Tgfbr1Q64729 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Tgfbr1Q64729 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Tgfbr1Q64729 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Tgfbr1Q64729 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
Tgfbr1Q64729 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
Tgfbr1Q64729 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Tgfbr1Q64729 AC164433.2-201ENSMUST00000226346 1701 ntBASIC17.78■□□□□ 0.44
Tgfbr1Q64729 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
Tgfbr1Q64729 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Tgfbr1Q64729 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
Tgfbr1Q64729 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Tgfbr1Q64729 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC17.77■□□□□ 0.44
Tgfbr1Q64729 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC17.77■□□□□ 0.44
Tgfbr1Q64729 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC17.77■□□□□ 0.44
Tgfbr1Q64729 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Tgfbr1Q64729 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
Tgfbr1Q64729 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Tgfbr1Q64729 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Tgfbr1Q64729 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
Tgfbr1Q64729 AC131739.1-201ENSMUST00000221692 1245 ntBASIC17.76■□□□□ 0.43
Tgfbr1Q64729 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
Tgfbr1Q64729 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Tgfbr1Q64729 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Tgfbr1Q64729 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Tgfbr1Q64729 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Tgfbr1Q64729 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Tgfbr1Q64729 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Tgfbr1Q64729 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
Tgfbr1Q64729 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Tgfbr1Q64729 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Tgfbr1Q64729 Dmtn-209ENSMUST00000228295 2572 ntBASIC17.74■□□□□ 0.43
Tgfbr1Q64729 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC17.74■□□□□ 0.43
Tgfbr1Q64729 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
Tgfbr1Q64729 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC17.74■□□□□ 0.43
Tgfbr1Q64729 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Tgfbr1Q64729 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Tgfbr1Q64729 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Tgfbr1Q64729 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Tgfbr1Q64729 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
Tgfbr1Q64729 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Tgfbr1Q64729 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Tgfbr1Q64729 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Tgfbr1Q64729 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Tgfbr1Q64729 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Tgfbr1Q64729 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC17.73■□□□□ 0.43
Tgfbr1Q64729 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
Tgfbr1Q64729 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC17.73■□□□□ 0.43
Tgfbr1Q64729 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Tgfbr1Q64729 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Tgfbr1Q64729 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC17.72■□□□□ 0.43
Tgfbr1Q64729 Gm8503-201ENSMUST00000118131 455 ntBASIC17.72■□□□□ 0.43
Tgfbr1Q64729 Gm4799-201ENSMUST00000095396 657 ntBASIC17.72■□□□□ 0.43
Tgfbr1Q64729 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Tgfbr1Q64729 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
Tgfbr1Q64729 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Tgfbr1Q64729 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Tgfbr1Q64729 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC17.71■□□□□ 0.43
Tgfbr1Q64729 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Tgfbr1Q64729 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Tgfbr1Q64729 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Tgfbr1Q64729 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Tgfbr1Q64729 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC17.71■□□□□ 0.42
Tgfbr1Q64729 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Tgfbr1Q64729 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC17.7■□□□□ 0.42
Tgfbr1Q64729 Gm26766-202ENSMUST00000227544 2347 ntBASIC17.7■□□□□ 0.42
Tgfbr1Q64729 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC17.7■□□□□ 0.42
Tgfbr1Q64729 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Tgfbr1Q64729 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Tgfbr1Q64729 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC17.69■□□□□ 0.42
Tgfbr1Q64729 Gm13889-201ENSMUST00000099689 1386 ntBASIC17.69■□□□□ 0.42
Tgfbr1Q64729 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Tgfbr1Q64729 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Tgfbr1Q64729 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Tgfbr1Q64729 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Tgfbr1Q64729 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
Tgfbr1Q64729 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Tgfbr1Q64729 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Tgfbr1Q64729 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Tgfbr1Q64729 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Tgfbr1Q64729 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 74.8 ms