Protein–RNA interactions for Protein: Q62247

Sox16, Protein SOX-16 (Fragment), mousemouse

Predictions only

Length 57 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox16Q62247 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Sox16Q62247 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Sox16Q62247 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Sox16Q62247 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
Sox16Q62247 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC12.66□□□□□ -0.38
Sox16Q62247 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Sox16Q62247 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Sox16Q62247 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Sox16Q62247 Gm9954-202ENSMUST00000198686 4725 ntBASIC12.66□□□□□ -0.38
Sox16Q62247 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Sox16Q62247 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Sox16Q62247 Iqck-206ENSMUST00000208658 2891 ntBASIC12.65□□□□□ -0.38
Sox16Q62247 Gm6345-201ENSMUST00000180378 1691 ntBASIC12.65□□□□□ -0.38
Sox16Q62247 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC12.65□□□□□ -0.38
Sox16Q62247 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Sox16Q62247 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Sox16Q62247 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Sox16Q62247 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Sox16Q62247 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Sox16Q62247 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Sox16Q62247 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Sox16Q62247 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Sox16Q62247 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Sox16Q62247 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Sox16Q62247 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Sox16Q62247 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Sox16Q62247 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Sox16Q62247 Gm4430-201ENSMUST00000192413 1943 ntBASIC12.64□□□□□ -0.39
Sox16Q62247 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Sox16Q62247 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Sox16Q62247 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Sox16Q62247 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Sox16Q62247 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Sox16Q62247 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Sox16Q62247 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC12.63□□□□□ -0.39
Sox16Q62247 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Sox16Q62247 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC12.63□□□□□ -0.39
Sox16Q62247 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Sox16Q62247 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Sox16Q62247 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Sox16Q62247 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Sox16Q62247 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Sox16Q62247 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Sox16Q62247 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Sox16Q62247 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Sox16Q62247 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Sox16Q62247 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Sox16Q62247 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Sox16Q62247 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Sox16Q62247 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Sox16Q62247 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Sox16Q62247 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Sox16Q62247 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Sox16Q62247 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Sox16Q62247 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Sox16Q62247 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Sox16Q62247 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Sox16Q62247 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Sox16Q62247 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Sox16Q62247 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Sox16Q62247 Gbp5-201ENSMUST00000090127 3055 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Sox16Q62247 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Sox16Q62247 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Sox16Q62247 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Sox16Q62247 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Sox16Q62247 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Sox16Q62247 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Sox16Q62247 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Sox16Q62247 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Sox16Q62247 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Sox16Q62247 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Sox16Q62247 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Sox16Q62247 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Sox16Q62247 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Sox16Q62247 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Sox16Q62247 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
Sox16Q62247 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Sox16Q62247 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
Sox16Q62247 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Sox16Q62247 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Sox16Q62247 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Sox16Q62247 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Sox16Q62247 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Sox16Q62247 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC12.59□□□□□ -0.39
Sox16Q62247 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Sox16Q62247 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Sox16Q62247 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Sox16Q62247 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Sox16Q62247 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC12.58□□□□□ -0.4
Sox16Q62247 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Sox16Q62247 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Sox16Q62247 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Sox16Q62247 Gm26766-202ENSMUST00000227544 2347 ntBASIC12.58□□□□□ -0.4
Sox16Q62247 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Sox16Q62247 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Sox16Q62247 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Sox16Q62247 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
Sox16Q62247 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Sox16Q62247 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Sox16Q62247 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 11.5 ms