Protein–RNA interactions for Protein: Q61908

Cmc4, Cx9C motif-containing protein 4, mousemouse

Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cmc4Q61908 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Cmc4Q61908 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Cmc4Q61908 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Cmc4Q61908 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Cmc4Q61908 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
Cmc4Q61908 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Cmc4Q61908 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC16.01■□□□□ 0.15
Cmc4Q61908 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Cmc4Q61908 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Cmc4Q61908 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Cmc4Q61908 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
Cmc4Q61908 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC16■□□□□ 0.15
Cmc4Q61908 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC16■□□□□ 0.15
Cmc4Q61908 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC16■□□□□ 0.15
Cmc4Q61908 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC16■□□□□ 0.15
Cmc4Q61908 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC16■□□□□ 0.15
Cmc4Q61908 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
Cmc4Q61908 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Cmc4Q61908 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Cmc4Q61908 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Cmc4Q61908 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Cmc4Q61908 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC15.98■□□□□ 0.15
Cmc4Q61908 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Cmc4Q61908 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC15.98■□□□□ 0.15
Cmc4Q61908 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Cmc4Q61908 Gm43592-201ENSMUST00000196922 1165 ntBASIC15.98■□□□□ 0.15
Cmc4Q61908 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Cmc4Q61908 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Cmc4Q61908 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Cmc4Q61908 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Cmc4Q61908 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC15.97■□□□□ 0.15
Cmc4Q61908 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Cmc4Q61908 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC15.97■□□□□ 0.15
Cmc4Q61908 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC15.97■□□□□ 0.15
Cmc4Q61908 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC15.97■□□□□ 0.15
Cmc4Q61908 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Cmc4Q61908 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Cmc4Q61908 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
Cmc4Q61908 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC15.97■□□□□ 0.15
Cmc4Q61908 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Cmc4Q61908 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Cmc4Q61908 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Cmc4Q61908 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Cmc4Q61908 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Cmc4Q61908 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Cmc4Q61908 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
Cmc4Q61908 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.14
Cmc4Q61908 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Cmc4Q61908 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC15.95■□□□□ 0.14
Cmc4Q61908 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Cmc4Q61908 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Cmc4Q61908 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Cmc4Q61908 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC15.95■□□□□ 0.14
Cmc4Q61908 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC15.95■□□□□ 0.14
Cmc4Q61908 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC15.95■□□□□ 0.14
Cmc4Q61908 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
Cmc4Q61908 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Cmc4Q61908 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC15.94■□□□□ 0.14
Cmc4Q61908 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC15.94■□□□□ 0.14
Cmc4Q61908 AC151971.4-201ENSMUST00000214717 704 ntBASIC15.94■□□□□ 0.14
Cmc4Q61908 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Cmc4Q61908 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC15.94■□□□□ 0.14
Cmc4Q61908 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Cmc4Q61908 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Cmc4Q61908 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Cmc4Q61908 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC15.94■□□□□ 0.14
Cmc4Q61908 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Cmc4Q61908 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Cmc4Q61908 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Cmc4Q61908 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
Cmc4Q61908 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Cmc4Q61908 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Cmc4Q61908 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Cmc4Q61908 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Cmc4Q61908 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Cmc4Q61908 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
Cmc4Q61908 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Cmc4Q61908 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Cmc4Q61908 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC15.92■□□□□ 0.14
Cmc4Q61908 Gm28731-201ENSMUST00000185564 1569 ntBASIC15.92■□□□□ 0.14
Cmc4Q61908 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC15.91■□□□□ 0.14
Cmc4Q61908 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Cmc4Q61908 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Cmc4Q61908 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC15.91■□□□□ 0.14
Cmc4Q61908 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Cmc4Q61908 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Cmc4Q61908 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
Cmc4Q61908 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Cmc4Q61908 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Cmc4Q61908 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Cmc4Q61908 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Cmc4Q61908 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Cmc4Q61908 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC15.9■□□□□ 0.14
Cmc4Q61908 Gm5921-201ENSMUST00000075898 882 ntBASIC15.9■□□□□ 0.14
Cmc4Q61908 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Cmc4Q61908 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
Cmc4Q61908 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Cmc4Q61908 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Cmc4Q61908 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Cmc4Q61908 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
Retrieved 100 of 76,532 protein–RNA pairs in 100.6 ms