Protein–RNA interactions for Protein: Q61473

Sox17, Transcription factor SOX-17, mousemouse

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox17Q61473 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Sox17Q61473 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Sox17Q61473 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Sox17Q61473 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Sox17Q61473 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Sox17Q61473 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Sox17Q61473 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
Sox17Q61473 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC20.53■□□□□ 0.88
Sox17Q61473 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC20.53■□□□□ 0.88
Sox17Q61473 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Sox17Q61473 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC20.53■□□□□ 0.88
Sox17Q61473 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Sox17Q61473 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Sox17Q61473 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Sox17Q61473 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Sox17Q61473 Gm42809-201ENSMUST00000198429 1138 ntBASIC20.52■□□□□ 0.88
Sox17Q61473 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Sox17Q61473 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC20.52■□□□□ 0.87
Sox17Q61473 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC20.51■□□□□ 0.87
Sox17Q61473 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Sox17Q61473 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
Sox17Q61473 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Sox17Q61473 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Sox17Q61473 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Sox17Q61473 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
Sox17Q61473 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC20.5■□□□□ 0.87
Sox17Q61473 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
Sox17Q61473 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
Sox17Q61473 Gm12504-201ENSMUST00000120860 2231 ntBASIC20.5■□□□□ 0.87
Sox17Q61473 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Sox17Q61473 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
Sox17Q61473 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Sox17Q61473 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC20.49■□□□□ 0.87
Sox17Q61473 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Sox17Q61473 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC20.49■□□□□ 0.87
Sox17Q61473 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Sox17Q61473 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Sox17Q61473 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Sox17Q61473 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Sox17Q61473 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC20.48■□□□□ 0.87
Sox17Q61473 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Sox17Q61473 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Sox17Q61473 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC20.47■□□□□ 0.87
Sox17Q61473 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Sox17Q61473 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Sox17Q61473 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC20.47■□□□□ 0.87
Sox17Q61473 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC20.46■□□□□ 0.87
Sox17Q61473 Gm28731-201ENSMUST00000185564 1569 ntBASIC20.46■□□□□ 0.87
Sox17Q61473 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
Sox17Q61473 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Sox17Q61473 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Sox17Q61473 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC20.46■□□□□ 0.87
Sox17Q61473 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Sox17Q61473 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Sox17Q61473 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
Sox17Q61473 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
Sox17Q61473 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Sox17Q61473 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Sox17Q61473 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
Sox17Q61473 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Sox17Q61473 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC20.44■□□□□ 0.86
Sox17Q61473 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Sox17Q61473 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Sox17Q61473 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Sox17Q61473 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Sox17Q61473 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Sox17Q61473 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Sox17Q61473 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC20.43■□□□□ 0.86
Sox17Q61473 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC20.43■□□□□ 0.86
Sox17Q61473 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Sox17Q61473 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
Sox17Q61473 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Sox17Q61473 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
Sox17Q61473 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Sox17Q61473 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Sox17Q61473 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Sox17Q61473 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Sox17Q61473 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Sox17Q61473 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Sox17Q61473 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Sox17Q61473 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.86
Sox17Q61473 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Sox17Q61473 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Sox17Q61473 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC20.39■□□□□ 0.85
Sox17Q61473 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC20.39■□□□□ 0.85
Sox17Q61473 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Sox17Q61473 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Sox17Q61473 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Sox17Q61473 Gm9910-201ENSMUST00000195385 1550 ntBASIC20.38■□□□□ 0.85
Sox17Q61473 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Sox17Q61473 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Sox17Q61473 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Sox17Q61473 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Sox17Q61473 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC20.38■□□□□ 0.85
Sox17Q61473 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
Sox17Q61473 AC153524.1-201ENSMUST00000220436 1935 ntBASIC20.37■□□□□ 0.85
Sox17Q61473 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Sox17Q61473 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Sox17Q61473 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC20.37■□□□□ 0.85
Sox17Q61473 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 17 ms