Protein–RNA interactions for Protein: Q61080

Foxf1, Forkhead box protein F1, mousemouse

Predictions only

Length 378 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxf1Q61080 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Foxf1Q61080 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Foxf1Q61080 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC18.4■□□□□ 0.54
Foxf1Q61080 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
Foxf1Q61080 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC18.39■□□□□ 0.54
Foxf1Q61080 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.54
Foxf1Q61080 Gm26766-202ENSMUST00000227544 2347 ntBASIC18.39■□□□□ 0.53
Foxf1Q61080 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Foxf1Q61080 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC18.39■□□□□ 0.53
Foxf1Q61080 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
Foxf1Q61080 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Foxf1Q61080 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Foxf1Q61080 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Foxf1Q61080 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC18.38■□□□□ 0.53
Foxf1Q61080 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
Foxf1Q61080 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Foxf1Q61080 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
Foxf1Q61080 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Foxf1Q61080 Gm11687-201ENSMUST00000118911 886 ntBASIC18.38■□□□□ 0.53
Foxf1Q61080 Gm16437-201ENSMUST00000025669 507 ntBASIC18.38■□□□□ 0.53
Foxf1Q61080 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC18.38■□□□□ 0.53
Foxf1Q61080 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Foxf1Q61080 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Foxf1Q61080 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Foxf1Q61080 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Foxf1Q61080 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
Foxf1Q61080 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
Foxf1Q61080 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
Foxf1Q61080 Gm6934-201ENSMUST00000194780 1905 ntBASIC18.37■□□□□ 0.53
Foxf1Q61080 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Foxf1Q61080 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Foxf1Q61080 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC18.37■□□□□ 0.53
Foxf1Q61080 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC18.36■□□□□ 0.53
Foxf1Q61080 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Foxf1Q61080 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC18.36■□□□□ 0.53
Foxf1Q61080 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
Foxf1Q61080 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Foxf1Q61080 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Foxf1Q61080 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Foxf1Q61080 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Foxf1Q61080 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Foxf1Q61080 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Foxf1Q61080 Gm7199-201ENSMUST00000118327 1485 ntBASIC18.34■□□□□ 0.53
Foxf1Q61080 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Foxf1Q61080 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
Foxf1Q61080 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Foxf1Q61080 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC18.34■□□□□ 0.53
Foxf1Q61080 Gm44428-201ENSMUST00000204474 874 ntBASIC18.34■□□□□ 0.53
Foxf1Q61080 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
Foxf1Q61080 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
Foxf1Q61080 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC18.34■□□□□ 0.53
Foxf1Q61080 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Foxf1Q61080 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC18.33■□□□□ 0.53
Foxf1Q61080 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
Foxf1Q61080 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Foxf1Q61080 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
Foxf1Q61080 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Foxf1Q61080 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Foxf1Q61080 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Foxf1Q61080 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Foxf1Q61080 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Foxf1Q61080 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
Foxf1Q61080 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Foxf1Q61080 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Foxf1Q61080 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC18.31■□□□□ 0.52
Foxf1Q61080 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Foxf1Q61080 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC18.31■□□□□ 0.52
Foxf1Q61080 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Foxf1Q61080 Gm11175-201ENSMUST00000116172 543 ntBASIC18.3■□□□□ 0.52
Foxf1Q61080 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
Foxf1Q61080 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Foxf1Q61080 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Foxf1Q61080 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC18.29■□□□□ 0.52
Foxf1Q61080 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Foxf1Q61080 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Foxf1Q61080 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Foxf1Q61080 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
Foxf1Q61080 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC18.28■□□□□ 0.52
Foxf1Q61080 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Foxf1Q61080 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Foxf1Q61080 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC18.27■□□□□ 0.52
Foxf1Q61080 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Foxf1Q61080 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Foxf1Q61080 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC18.27■□□□□ 0.51
Foxf1Q61080 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.51
Foxf1Q61080 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
Foxf1Q61080 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Foxf1Q61080 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
Foxf1Q61080 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Foxf1Q61080 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
Foxf1Q61080 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
Foxf1Q61080 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
Foxf1Q61080 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Foxf1Q61080 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC18.25■□□□□ 0.51
Foxf1Q61080 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Foxf1Q61080 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Foxf1Q61080 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC18.24■□□□□ 0.51
Foxf1Q61080 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
Foxf1Q61080 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC18.24■□□□□ 0.51
Foxf1Q61080 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 19.3 ms