Protein–RNA interactions for Protein: Q5R1H8

Trav8d-1, T cell receptor alpha variable 8D-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8d-1Q5R1H8 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trav8d-1Q5R1H8 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trav8d-1Q5R1H8 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trav8d-1Q5R1H8 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trav8d-1Q5R1H8 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Trav8d-1Q5R1H8 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
Trav8d-1Q5R1H8 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
Trav8d-1Q5R1H8 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
Trav8d-1Q5R1H8 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trav8d-1Q5R1H8 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Trav8d-1Q5R1H8 AC131739.1-201ENSMUST00000221692 1245 ntBASIC17.85■□□□□ 0.45
Trav8d-1Q5R1H8 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Trav8d-1Q5R1H8 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Trav8d-1Q5R1H8 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Trav8d-1Q5R1H8 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trav8d-1Q5R1H8 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC17.84■□□□□ 0.45
Trav8d-1Q5R1H8 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trav8d-1Q5R1H8 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trav8d-1Q5R1H8 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC17.84■□□□□ 0.45
Trav8d-1Q5R1H8 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trav8d-1Q5R1H8 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.45
Trav8d-1Q5R1H8 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Trav8d-1Q5R1H8 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
Trav8d-1Q5R1H8 Gm11599-201ENSMUST00000118720 878 ntBASIC17.83■□□□□ 0.44
Trav8d-1Q5R1H8 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC17.83■□□□□ 0.44
Trav8d-1Q5R1H8 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC17.83■□□□□ 0.44
Trav8d-1Q5R1H8 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Trav8d-1Q5R1H8 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Trav8d-1Q5R1H8 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
Trav8d-1Q5R1H8 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trav8d-1Q5R1H8 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trav8d-1Q5R1H8 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
Trav8d-1Q5R1H8 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC17.82■□□□□ 0.44
Trav8d-1Q5R1H8 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trav8d-1Q5R1H8 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trav8d-1Q5R1H8 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC17.82■□□□□ 0.44
Trav8d-1Q5R1H8 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC17.81■□□□□ 0.44
Trav8d-1Q5R1H8 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trav8d-1Q5R1H8 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Trav8d-1Q5R1H8 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trav8d-1Q5R1H8 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Trav8d-1Q5R1H8 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trav8d-1Q5R1H8 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
Trav8d-1Q5R1H8 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trav8d-1Q5R1H8 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trav8d-1Q5R1H8 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trav8d-1Q5R1H8 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
Trav8d-1Q5R1H8 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
Trav8d-1Q5R1H8 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trav8d-1Q5R1H8 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trav8d-1Q5R1H8 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
Trav8d-1Q5R1H8 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Trav8d-1Q5R1H8 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trav8d-1Q5R1H8 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
Trav8d-1Q5R1H8 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trav8d-1Q5R1H8 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trav8d-1Q5R1H8 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
Trav8d-1Q5R1H8 Gm32051-202ENSMUST00000197905 2385 ntBASIC17.77■□□□□ 0.44
Trav8d-1Q5R1H8 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Trav8d-1Q5R1H8 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Trav8d-1Q5R1H8 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
Trav8d-1Q5R1H8 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC17.77■□□□□ 0.44
Trav8d-1Q5R1H8 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Trav8d-1Q5R1H8 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Trav8d-1Q5R1H8 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trav8d-1Q5R1H8 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trav8d-1Q5R1H8 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trav8d-1Q5R1H8 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trav8d-1Q5R1H8 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC17.76■□□□□ 0.43
Trav8d-1Q5R1H8 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC17.76■□□□□ 0.43
Trav8d-1Q5R1H8 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trav8d-1Q5R1H8 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC17.76■□□□□ 0.43
Trav8d-1Q5R1H8 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trav8d-1Q5R1H8 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Trav8d-1Q5R1H8 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
Trav8d-1Q5R1H8 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
Trav8d-1Q5R1H8 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trav8d-1Q5R1H8 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trav8d-1Q5R1H8 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
Trav8d-1Q5R1H8 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Trav8d-1Q5R1H8 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trav8d-1Q5R1H8 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Trav8d-1Q5R1H8 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trav8d-1Q5R1H8 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trav8d-1Q5R1H8 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trav8d-1Q5R1H8 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC17.74■□□□□ 0.43
Trav8d-1Q5R1H8 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trav8d-1Q5R1H8 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
Trav8d-1Q5R1H8 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trav8d-1Q5R1H8 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
Trav8d-1Q5R1H8 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trav8d-1Q5R1H8 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
Trav8d-1Q5R1H8 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trav8d-1Q5R1H8 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Trav8d-1Q5R1H8 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trav8d-1Q5R1H8 Gm14121-201ENSMUST00000121441 1380 ntBASIC17.72■□□□□ 0.43
Trav8d-1Q5R1H8 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Trav8d-1Q5R1H8 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trav8d-1Q5R1H8 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
Trav8d-1Q5R1H8 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC17.72■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 21.8 ms