Protein–RNA interactions for Protein: Q5DTM8

Rnf20, E3 ubiquitin-protein ligase BRE1A, mousemouse

Predictions only

Length 973 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf20Q5DTM8 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
Rnf20Q5DTM8 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC26.06■■□□□ 1.76
Rnf20Q5DTM8 Gm11175-201ENSMUST00000116172 543 ntBASIC26.06■■□□□ 1.76
Rnf20Q5DTM8 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC26.06■■□□□ 1.76
Rnf20Q5DTM8 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC26.06■■□□□ 1.76
Rnf20Q5DTM8 Gm22567-201ENSMUST00000175542 342 ntBASIC26.06■■□□□ 1.76
Rnf20Q5DTM8 AC151971.4-201ENSMUST00000214717 704 ntBASIC26.06■■□□□ 1.76
Rnf20Q5DTM8 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC26.06■■□□□ 1.76
Rnf20Q5DTM8 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC26.06■■□□□ 1.76
Rnf20Q5DTM8 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
Rnf20Q5DTM8 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
Rnf20Q5DTM8 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
Rnf20Q5DTM8 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC26.05■■□□□ 1.76
Rnf20Q5DTM8 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC26.04■■□□□ 1.76
Rnf20Q5DTM8 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC26.04■■□□□ 1.76
Rnf20Q5DTM8 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
Rnf20Q5DTM8 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
Rnf20Q5DTM8 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC26.04■■□□□ 1.76
Rnf20Q5DTM8 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
Rnf20Q5DTM8 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC26.04■■□□□ 1.76
Rnf20Q5DTM8 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC26.03■■□□□ 1.76
Rnf20Q5DTM8 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC26.03■■□□□ 1.76
Rnf20Q5DTM8 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC26.02■■□□□ 1.76
Rnf20Q5DTM8 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
Rnf20Q5DTM8 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC26.02■■□□□ 1.76
Rnf20Q5DTM8 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC26.02■■□□□ 1.76
Rnf20Q5DTM8 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
Rnf20Q5DTM8 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC26.02■■□□□ 1.76
Rnf20Q5DTM8 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC26.02■■□□□ 1.76
Rnf20Q5DTM8 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC26.01■■□□□ 1.75
Rnf20Q5DTM8 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC26.01■■□□□ 1.75
Rnf20Q5DTM8 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC26.01■■□□□ 1.75
Rnf20Q5DTM8 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
Rnf20Q5DTM8 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
Rnf20Q5DTM8 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
Rnf20Q5DTM8 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
Rnf20Q5DTM8 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC26■■□□□ 1.75
Rnf20Q5DTM8 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC26■■□□□ 1.75
Rnf20Q5DTM8 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC26■■□□□ 1.75
Rnf20Q5DTM8 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC26■■□□□ 1.75
Rnf20Q5DTM8 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
Rnf20Q5DTM8 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC26■■□□□ 1.75
Rnf20Q5DTM8 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC26■■□□□ 1.75
Rnf20Q5DTM8 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
Rnf20Q5DTM8 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
Rnf20Q5DTM8 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC25.99■■□□□ 1.75
Rnf20Q5DTM8 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC25.99■■□□□ 1.75
Rnf20Q5DTM8 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC25.99■■□□□ 1.75
Rnf20Q5DTM8 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC25.99■■□□□ 1.75
Rnf20Q5DTM8 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
Rnf20Q5DTM8 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC25.99■■□□□ 1.75
Rnf20Q5DTM8 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC25.99■■□□□ 1.75
Rnf20Q5DTM8 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC25.99■■□□□ 1.75
Rnf20Q5DTM8 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
Rnf20Q5DTM8 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
Rnf20Q5DTM8 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
Rnf20Q5DTM8 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC25.98■■□□□ 1.75
Rnf20Q5DTM8 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
Rnf20Q5DTM8 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
Rnf20Q5DTM8 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC25.98■■□□□ 1.75
Rnf20Q5DTM8 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC25.98■■□□□ 1.75
Rnf20Q5DTM8 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC25.98■■□□□ 1.75
Rnf20Q5DTM8 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC25.98■■□□□ 1.75
Rnf20Q5DTM8 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC25.97■■□□□ 1.75
Rnf20Q5DTM8 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
Rnf20Q5DTM8 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
Rnf20Q5DTM8 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC25.97■■□□□ 1.75
Rnf20Q5DTM8 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
Rnf20Q5DTM8 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC25.97■■□□□ 1.75
Rnf20Q5DTM8 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
Rnf20Q5DTM8 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC25.96■■□□□ 1.75
Rnf20Q5DTM8 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
Rnf20Q5DTM8 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
Rnf20Q5DTM8 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
Rnf20Q5DTM8 AC117245.4-201ENSMUST00000217388 1646 ntBASIC25.96■■□□□ 1.75
Rnf20Q5DTM8 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
Rnf20Q5DTM8 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC25.94■■□□□ 1.74
Rnf20Q5DTM8 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC25.94■■□□□ 1.74
Rnf20Q5DTM8 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC25.94■■□□□ 1.74
Rnf20Q5DTM8 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
Rnf20Q5DTM8 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC25.93■■□□□ 1.74
Rnf20Q5DTM8 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC25.93■■□□□ 1.74
Rnf20Q5DTM8 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC25.93■■□□□ 1.74
Rnf20Q5DTM8 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
Rnf20Q5DTM8 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
Rnf20Q5DTM8 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
Rnf20Q5DTM8 Mir6538-201ENSMUST00000183713 110 ntBASIC25.92■■□□□ 1.74
Rnf20Q5DTM8 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC25.92■■□□□ 1.74
Rnf20Q5DTM8 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC25.92■■□□□ 1.74
Rnf20Q5DTM8 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
Rnf20Q5DTM8 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
Rnf20Q5DTM8 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
Rnf20Q5DTM8 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC25.91■■□□□ 1.74
Rnf20Q5DTM8 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC25.9■■□□□ 1.74
Rnf20Q5DTM8 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC25.9■■□□□ 1.74
Rnf20Q5DTM8 Gm27502-201ENSMUST00000183495 199 ntBASIC25.9■■□□□ 1.74
Rnf20Q5DTM8 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC25.9■■□□□ 1.74
Rnf20Q5DTM8 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
Rnf20Q5DTM8 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
Rnf20Q5DTM8 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC25.9■■□□□ 1.74
Retrieved 100 of 76,532 protein–RNA pairs in 257.6 ms