Protein–RNA interactions for Protein: Q3UV31

Rnf223, RING finger protein 223, mousemouse

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf223Q3UV31 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Rnf223Q3UV31 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Rnf223Q3UV31 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC21.46■■□□□ 1.03
Rnf223Q3UV31 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC21.46■■□□□ 1.03
Rnf223Q3UV31 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Rnf223Q3UV31 Gm43566-201ENSMUST00000196851 808 ntBASIC21.46■■□□□ 1.03
Rnf223Q3UV31 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC21.46■■□□□ 1.03
Rnf223Q3UV31 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Rnf223Q3UV31 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Rnf223Q3UV31 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Rnf223Q3UV31 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Rnf223Q3UV31 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC21.45■■□□□ 1.02
Rnf223Q3UV31 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Rnf223Q3UV31 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Rnf223Q3UV31 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Rnf223Q3UV31 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Rnf223Q3UV31 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Rnf223Q3UV31 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Rnf223Q3UV31 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
Rnf223Q3UV31 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Rnf223Q3UV31 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC21.44■■□□□ 1.02
Rnf223Q3UV31 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC21.44■■□□□ 1.02
Rnf223Q3UV31 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
Rnf223Q3UV31 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC21.43■■□□□ 1.02
Rnf223Q3UV31 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Rnf223Q3UV31 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC21.43■■□□□ 1.02
Rnf223Q3UV31 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC21.42■■□□□ 1.02
Rnf223Q3UV31 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Rnf223Q3UV31 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Rnf223Q3UV31 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC21.42■■□□□ 1.02
Rnf223Q3UV31 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Rnf223Q3UV31 AC117245.4-201ENSMUST00000217388 1646 ntBASIC21.41■■□□□ 1.02
Rnf223Q3UV31 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC21.41■■□□□ 1.02
Rnf223Q3UV31 Gm6934-201ENSMUST00000194780 1905 ntBASIC21.41■■□□□ 1.02
Rnf223Q3UV31 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC21.41■■□□□ 1.02
Rnf223Q3UV31 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Rnf223Q3UV31 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC21.4■■□□□ 1.02
Rnf223Q3UV31 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
Rnf223Q3UV31 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC21.39■■□□□ 1.01
Rnf223Q3UV31 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC21.39■■□□□ 1.01
Rnf223Q3UV31 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Rnf223Q3UV31 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Rnf223Q3UV31 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
Rnf223Q3UV31 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Rnf223Q3UV31 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
Rnf223Q3UV31 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Rnf223Q3UV31 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC21.38■■□□□ 1.01
Rnf223Q3UV31 Gm28731-201ENSMUST00000185564 1569 ntBASIC21.38■■□□□ 1.01
Rnf223Q3UV31 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Rnf223Q3UV31 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC21.38■■□□□ 1.01
Rnf223Q3UV31 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Rnf223Q3UV31 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
Rnf223Q3UV31 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Rnf223Q3UV31 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Rnf223Q3UV31 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Rnf223Q3UV31 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Rnf223Q3UV31 Gm15546-201ENSMUST00000122095 826 ntBASIC21.37■■□□□ 1.01
Rnf223Q3UV31 Gm5522-201ENSMUST00000189483 1242 ntBASIC21.37■■□□□ 1.01
Rnf223Q3UV31 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC21.37■■□□□ 1.01
Rnf223Q3UV31 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC21.37■■□□□ 1.01
Rnf223Q3UV31 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC21.37■■□□□ 1.01
Rnf223Q3UV31 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Rnf223Q3UV31 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC21.37■■□□□ 1.01
Rnf223Q3UV31 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC21.36■■□□□ 1.01
Rnf223Q3UV31 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Rnf223Q3UV31 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC21.36■■□□□ 1.01
Rnf223Q3UV31 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC21.36■■□□□ 1.01
Rnf223Q3UV31 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Rnf223Q3UV31 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Rnf223Q3UV31 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Rnf223Q3UV31 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC21.36■■□□□ 1.01
Rnf223Q3UV31 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Rnf223Q3UV31 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Rnf223Q3UV31 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Rnf223Q3UV31 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC21.35■■□□□ 1.01
Rnf223Q3UV31 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Rnf223Q3UV31 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC21.34■■□□□ 1.01
Rnf223Q3UV31 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Rnf223Q3UV31 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Rnf223Q3UV31 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC21.34■■□□□ 1.01
Rnf223Q3UV31 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC21.34■■□□□ 1.01
Rnf223Q3UV31 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC21.33■■□□□ 1.01
Rnf223Q3UV31 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Rnf223Q3UV31 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC21.33■■□□□ 1.01
Rnf223Q3UV31 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC21.33■■□□□ 1
Rnf223Q3UV31 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Rnf223Q3UV31 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC21.33■■□□□ 1
Rnf223Q3UV31 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC21.32■■□□□ 1
Rnf223Q3UV31 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC21.32■■□□□ 1
Rnf223Q3UV31 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
Rnf223Q3UV31 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Rnf223Q3UV31 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC21.32■■□□□ 1
Rnf223Q3UV31 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC21.32■■□□□ 1
Rnf223Q3UV31 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC21.32■■□□□ 1
Rnf223Q3UV31 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
Rnf223Q3UV31 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC21.31■■□□□ 1
Rnf223Q3UV31 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Rnf223Q3UV31 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC21.31■■□□□ 1
Rnf223Q3UV31 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
Rnf223Q3UV31 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC21.31■■□□□ 1
Retrieved 100 of 76,532 protein–RNA pairs in 39.3 ms