Protein–RNA interactions for Protein: Q3USQ7

Syndig1l, Synapse differentiation-inducing gene protein 1-like, mousemouse

Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syndig1lQ3USQ7 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
Syndig1lQ3USQ7 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
Syndig1lQ3USQ7 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Syndig1lQ3USQ7 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Syndig1lQ3USQ7 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Syndig1lQ3USQ7 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC20.65■□□□□ 0.9
Syndig1lQ3USQ7 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Syndig1lQ3USQ7 AC122317.2-201ENSMUST00000218708 1248 ntBASIC20.64■□□□□ 0.89
Syndig1lQ3USQ7 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Syndig1lQ3USQ7 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
Syndig1lQ3USQ7 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Syndig1lQ3USQ7 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
Syndig1lQ3USQ7 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC20.63■□□□□ 0.89
Syndig1lQ3USQ7 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Syndig1lQ3USQ7 AC153962.1-201ENSMUST00000218530 1948 ntBASIC20.63■□□□□ 0.89
Syndig1lQ3USQ7 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Syndig1lQ3USQ7 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
Syndig1lQ3USQ7 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Syndig1lQ3USQ7 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Syndig1lQ3USQ7 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC20.61■□□□□ 0.89
Syndig1lQ3USQ7 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Syndig1lQ3USQ7 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Syndig1lQ3USQ7 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Syndig1lQ3USQ7 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
Syndig1lQ3USQ7 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Syndig1lQ3USQ7 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Syndig1lQ3USQ7 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Syndig1lQ3USQ7 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Syndig1lQ3USQ7 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Syndig1lQ3USQ7 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Syndig1lQ3USQ7 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
Syndig1lQ3USQ7 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
Syndig1lQ3USQ7 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Syndig1lQ3USQ7 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Syndig1lQ3USQ7 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC20.58■□□□□ 0.89
Syndig1lQ3USQ7 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC20.58■□□□□ 0.89
Syndig1lQ3USQ7 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC20.58■□□□□ 0.89
Syndig1lQ3USQ7 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Syndig1lQ3USQ7 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC20.58■□□□□ 0.88
Syndig1lQ3USQ7 Gm12818-201ENSMUST00000117562 1349 ntBASIC20.57■□□□□ 0.88
Syndig1lQ3USQ7 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Syndig1lQ3USQ7 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
Syndig1lQ3USQ7 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC20.57■□□□□ 0.88
Syndig1lQ3USQ7 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Syndig1lQ3USQ7 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Syndig1lQ3USQ7 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC20.56■□□□□ 0.88
Syndig1lQ3USQ7 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC20.56■□□□□ 0.88
Syndig1lQ3USQ7 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC20.56■□□□□ 0.88
Syndig1lQ3USQ7 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Syndig1lQ3USQ7 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Syndig1lQ3USQ7 Mir3960-201ENSMUST00000198213 73 ntBASIC20.55■□□□□ 0.88
Syndig1lQ3USQ7 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC20.55■□□□□ 0.88
Syndig1lQ3USQ7 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC20.55■□□□□ 0.88
Syndig1lQ3USQ7 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Syndig1lQ3USQ7 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
Syndig1lQ3USQ7 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Syndig1lQ3USQ7 AC154454.1-201ENSMUST00000225253 216 ntBASIC20.54■□□□□ 0.88
Syndig1lQ3USQ7 Terc-201ENSMUST00000082862 423 ntBASIC20.54■□□□□ 0.88
Syndig1lQ3USQ7 AC153524.1-201ENSMUST00000220436 1935 ntBASIC20.54■□□□□ 0.88
Syndig1lQ3USQ7 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Syndig1lQ3USQ7 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Syndig1lQ3USQ7 Gm32051-202ENSMUST00000197905 2385 ntBASIC20.53■□□□□ 0.88
Syndig1lQ3USQ7 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Syndig1lQ3USQ7 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Syndig1lQ3USQ7 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Syndig1lQ3USQ7 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Syndig1lQ3USQ7 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Syndig1lQ3USQ7 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Syndig1lQ3USQ7 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Syndig1lQ3USQ7 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Syndig1lQ3USQ7 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
Syndig1lQ3USQ7 Gm8503-201ENSMUST00000118131 455 ntBASIC20.52■□□□□ 0.88
Syndig1lQ3USQ7 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Syndig1lQ3USQ7 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Syndig1lQ3USQ7 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
Syndig1lQ3USQ7 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Syndig1lQ3USQ7 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
Syndig1lQ3USQ7 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC20.52■□□□□ 0.87
Syndig1lQ3USQ7 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Syndig1lQ3USQ7 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Syndig1lQ3USQ7 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Syndig1lQ3USQ7 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Syndig1lQ3USQ7 AC115037.1-201ENSMUST00000223391 2173 ntBASIC20.51■□□□□ 0.87
Syndig1lQ3USQ7 Gm6277-202ENSMUST00000224036 2779 ntBASIC20.51■□□□□ 0.87
Syndig1lQ3USQ7 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Syndig1lQ3USQ7 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Syndig1lQ3USQ7 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC20.5■□□□□ 0.87
Syndig1lQ3USQ7 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Syndig1lQ3USQ7 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Syndig1lQ3USQ7 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Syndig1lQ3USQ7 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
Syndig1lQ3USQ7 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Syndig1lQ3USQ7 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Syndig1lQ3USQ7 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Syndig1lQ3USQ7 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Syndig1lQ3USQ7 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Syndig1lQ3USQ7 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Syndig1lQ3USQ7 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Syndig1lQ3USQ7 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Syndig1lQ3USQ7 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 39.8 ms