Protein–RNA interactions for Protein: Q3UPR0

Shisa3, Protein shisa-3 homolog, mousemouse

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa3Q3UPR0 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC18.93■□□□□ 0.62
Shisa3Q3UPR0 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC18.93■□□□□ 0.62
Shisa3Q3UPR0 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC18.93■□□□□ 0.62
Shisa3Q3UPR0 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Shisa3Q3UPR0 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC18.93■□□□□ 0.62
Shisa3Q3UPR0 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Shisa3Q3UPR0 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC18.92■□□□□ 0.62
Shisa3Q3UPR0 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Shisa3Q3UPR0 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Shisa3Q3UPR0 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Shisa3Q3UPR0 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Shisa3Q3UPR0 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Shisa3Q3UPR0 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC18.92■□□□□ 0.62
Shisa3Q3UPR0 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
Shisa3Q3UPR0 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Shisa3Q3UPR0 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Shisa3Q3UPR0 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC18.91■□□□□ 0.62
Shisa3Q3UPR0 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC18.91■□□□□ 0.62
Shisa3Q3UPR0 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC18.91■□□□□ 0.62
Shisa3Q3UPR0 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Shisa3Q3UPR0 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Shisa3Q3UPR0 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Shisa3Q3UPR0 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
Shisa3Q3UPR0 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Shisa3Q3UPR0 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
Shisa3Q3UPR0 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC18.9■□□□□ 0.62
Shisa3Q3UPR0 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Shisa3Q3UPR0 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Shisa3Q3UPR0 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Shisa3Q3UPR0 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Shisa3Q3UPR0 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Shisa3Q3UPR0 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC18.89■□□□□ 0.61
Shisa3Q3UPR0 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
Shisa3Q3UPR0 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC18.89■□□□□ 0.61
Shisa3Q3UPR0 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC18.88■□□□□ 0.61
Shisa3Q3UPR0 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Shisa3Q3UPR0 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
Shisa3Q3UPR0 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
Shisa3Q3UPR0 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Shisa3Q3UPR0 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Shisa3Q3UPR0 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Shisa3Q3UPR0 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC18.87■□□□□ 0.61
Shisa3Q3UPR0 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Shisa3Q3UPR0 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
Shisa3Q3UPR0 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Shisa3Q3UPR0 Gm11599-201ENSMUST00000118720 878 ntBASIC18.86■□□□□ 0.61
Shisa3Q3UPR0 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
Shisa3Q3UPR0 Gm12504-201ENSMUST00000120860 2231 ntBASIC18.86■□□□□ 0.61
Shisa3Q3UPR0 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Shisa3Q3UPR0 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Shisa3Q3UPR0 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC18.85■□□□□ 0.61
Shisa3Q3UPR0 AC131739.1-201ENSMUST00000221692 1245 ntBASIC18.85■□□□□ 0.61
Shisa3Q3UPR0 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC18.85■□□□□ 0.61
Shisa3Q3UPR0 AC153524.1-201ENSMUST00000220436 1935 ntBASIC18.84■□□□□ 0.61
Shisa3Q3UPR0 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Shisa3Q3UPR0 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Shisa3Q3UPR0 AC115037.1-201ENSMUST00000223391 2173 ntBASIC18.83■□□□□ 0.61
Shisa3Q3UPR0 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Shisa3Q3UPR0 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Shisa3Q3UPR0 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Shisa3Q3UPR0 Gm43006-201ENSMUST00000197702 1602 ntBASIC18.83■□□□□ 0.61
Shisa3Q3UPR0 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC18.83■□□□□ 0.6
Shisa3Q3UPR0 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
Shisa3Q3UPR0 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Shisa3Q3UPR0 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Shisa3Q3UPR0 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
Shisa3Q3UPR0 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
Shisa3Q3UPR0 Gm5987-201ENSMUST00000196433 1151 ntBASIC18.82■□□□□ 0.6
Shisa3Q3UPR0 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Shisa3Q3UPR0 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Shisa3Q3UPR0 Gm37415-201ENSMUST00000192265 2054 ntBASIC18.81■□□□□ 0.6
Shisa3Q3UPR0 Gm9910-201ENSMUST00000195385 1550 ntBASIC18.81■□□□□ 0.6
Shisa3Q3UPR0 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
Shisa3Q3UPR0 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Shisa3Q3UPR0 Gm37136-201ENSMUST00000194368 194 ntBASIC18.81■□□□□ 0.6
Shisa3Q3UPR0 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Shisa3Q3UPR0 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Shisa3Q3UPR0 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Shisa3Q3UPR0 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Shisa3Q3UPR0 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Shisa3Q3UPR0 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Shisa3Q3UPR0 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Shisa3Q3UPR0 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Shisa3Q3UPR0 Hsf1-207ENSMUST00000228371 2102 ntBASIC18.8■□□□□ 0.6
Shisa3Q3UPR0 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
Shisa3Q3UPR0 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Shisa3Q3UPR0 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Shisa3Q3UPR0 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Shisa3Q3UPR0 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC18.79■□□□□ 0.6
Shisa3Q3UPR0 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC18.79■□□□□ 0.6
Shisa3Q3UPR0 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Shisa3Q3UPR0 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Shisa3Q3UPR0 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Shisa3Q3UPR0 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Shisa3Q3UPR0 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC18.78■□□□□ 0.6
Shisa3Q3UPR0 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Shisa3Q3UPR0 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Shisa3Q3UPR0 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Shisa3Q3UPR0 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Shisa3Q3UPR0 Gm28731-201ENSMUST00000185564 1569 ntBASIC18.77■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 13.9 ms