Protein–RNA interactions for Protein: Q3UH53

Sdk1, Protein sidekick-1, mousemouse

Predictions only

Length 2,193 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdk1Q3UH53 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Sdk1Q3UH53 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Sdk1Q3UH53 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC18.86■□□□□ 0.61
Sdk1Q3UH53 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC18.86■□□□□ 0.61
Sdk1Q3UH53 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Sdk1Q3UH53 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
Sdk1Q3UH53 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Sdk1Q3UH53 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Sdk1Q3UH53 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
Sdk1Q3UH53 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC18.84■□□□□ 0.61
Sdk1Q3UH53 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Sdk1Q3UH53 Gm28536-201ENSMUST00000190971 1317 ntBASIC18.84■□□□□ 0.61
Sdk1Q3UH53 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Sdk1Q3UH53 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC18.83■□□□□ 0.6
Sdk1Q3UH53 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC18.82■□□□□ 0.6
Sdk1Q3UH53 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Sdk1Q3UH53 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC18.82■□□□□ 0.6
Sdk1Q3UH53 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Sdk1Q3UH53 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Sdk1Q3UH53 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Sdk1Q3UH53 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Sdk1Q3UH53 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC18.81■□□□□ 0.6
Sdk1Q3UH53 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Sdk1Q3UH53 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Sdk1Q3UH53 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC18.81■□□□□ 0.6
Sdk1Q3UH53 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Sdk1Q3UH53 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Sdk1Q3UH53 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Sdk1Q3UH53 Gm6206-201ENSMUST00000133472 2199 ntBASIC18.8■□□□□ 0.6
Sdk1Q3UH53 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
Sdk1Q3UH53 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Sdk1Q3UH53 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC18.79■□□□□ 0.6
Sdk1Q3UH53 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
Sdk1Q3UH53 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC18.79■□□□□ 0.6
Sdk1Q3UH53 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Sdk1Q3UH53 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC18.79■□□□□ 0.6
Sdk1Q3UH53 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Sdk1Q3UH53 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Sdk1Q3UH53 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Sdk1Q3UH53 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Sdk1Q3UH53 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Sdk1Q3UH53 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Sdk1Q3UH53 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Sdk1Q3UH53 Flvcr1-202ENSMUST00000191946 1216 ntBASIC18.78■□□□□ 0.6
Sdk1Q3UH53 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Sdk1Q3UH53 AC164433.2-201ENSMUST00000226346 1701 ntBASIC18.78■□□□□ 0.6
Sdk1Q3UH53 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC18.78■□□□□ 0.6
Sdk1Q3UH53 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Sdk1Q3UH53 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Sdk1Q3UH53 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
Sdk1Q3UH53 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC18.77■□□□□ 0.6
Sdk1Q3UH53 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Sdk1Q3UH53 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
Sdk1Q3UH53 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Sdk1Q3UH53 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Sdk1Q3UH53 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC18.76■□□□□ 0.59
Sdk1Q3UH53 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
Sdk1Q3UH53 Gm7199-201ENSMUST00000118327 1485 ntBASIC18.76■□□□□ 0.59
Sdk1Q3UH53 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Sdk1Q3UH53 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Sdk1Q3UH53 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Sdk1Q3UH53 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC18.76■□□□□ 0.59
Sdk1Q3UH53 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Sdk1Q3UH53 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Sdk1Q3UH53 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC18.76■□□□□ 0.59
Sdk1Q3UH53 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Sdk1Q3UH53 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Sdk1Q3UH53 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC18.75■□□□□ 0.59
Sdk1Q3UH53 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Sdk1Q3UH53 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Sdk1Q3UH53 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
Sdk1Q3UH53 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Sdk1Q3UH53 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC18.74■□□□□ 0.59
Sdk1Q3UH53 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC18.74■□□□□ 0.59
Sdk1Q3UH53 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
Sdk1Q3UH53 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC18.74■□□□□ 0.59
Sdk1Q3UH53 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
Sdk1Q3UH53 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC18.74■□□□□ 0.59
Sdk1Q3UH53 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Sdk1Q3UH53 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Sdk1Q3UH53 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
Sdk1Q3UH53 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC18.73■□□□□ 0.59
Sdk1Q3UH53 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
Sdk1Q3UH53 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Sdk1Q3UH53 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Sdk1Q3UH53 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
Sdk1Q3UH53 Gm40881-201ENSMUST00000223397 166 ntBASIC18.72■□□□□ 0.59
Sdk1Q3UH53 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Sdk1Q3UH53 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Sdk1Q3UH53 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Sdk1Q3UH53 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Sdk1Q3UH53 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
Sdk1Q3UH53 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC18.72■□□□□ 0.59
Sdk1Q3UH53 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Sdk1Q3UH53 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Sdk1Q3UH53 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Sdk1Q3UH53 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Sdk1Q3UH53 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Sdk1Q3UH53 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Sdk1Q3UH53 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 19.6 ms