Protein–RNA interactions for Protein: P97742

Cpt1a, Carnitine O-palmitoyltransferase 1, liver isoform, mousemouse

Predictions only

Length 773 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpt1aP97742 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Cpt1aP97742 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Cpt1aP97742 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC21.4■■□□□ 1.02
Cpt1aP97742 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
Cpt1aP97742 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
Cpt1aP97742 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Cpt1aP97742 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC21.38■■□□□ 1.01
Cpt1aP97742 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC21.38■■□□□ 1.01
Cpt1aP97742 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Cpt1aP97742 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Cpt1aP97742 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC21.38■■□□□ 1.01
Cpt1aP97742 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Cpt1aP97742 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC21.37■■□□□ 1.01
Cpt1aP97742 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Cpt1aP97742 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC21.37■■□□□ 1.01
Cpt1aP97742 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Cpt1aP97742 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
Cpt1aP97742 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Cpt1aP97742 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Cpt1aP97742 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Cpt1aP97742 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC21.36■■□□□ 1.01
Cpt1aP97742 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Cpt1aP97742 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Cpt1aP97742 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC21.35■■□□□ 1.01
Cpt1aP97742 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Cpt1aP97742 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC21.35■■□□□ 1.01
Cpt1aP97742 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Cpt1aP97742 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC21.35■■□□□ 1.01
Cpt1aP97742 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC21.35■■□□□ 1.01
Cpt1aP97742 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Cpt1aP97742 Gm6934-201ENSMUST00000194780 1905 ntBASIC21.34■■□□□ 1.01
Cpt1aP97742 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Cpt1aP97742 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Cpt1aP97742 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC21.34■■□□□ 1.01
Cpt1aP97742 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Cpt1aP97742 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC21.34■■□□□ 1.01
Cpt1aP97742 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Cpt1aP97742 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
Cpt1aP97742 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Cpt1aP97742 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
Cpt1aP97742 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Cpt1aP97742 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC21.33■■□□□ 1.01
Cpt1aP97742 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
Cpt1aP97742 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC21.33■■□□□ 1.01
Cpt1aP97742 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
Cpt1aP97742 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC21.33■■□□□ 1
Cpt1aP97742 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Cpt1aP97742 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC21.33■■□□□ 1
Cpt1aP97742 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC21.33■■□□□ 1
Cpt1aP97742 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC21.32■■□□□ 1
Cpt1aP97742 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Cpt1aP97742 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Cpt1aP97742 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC21.32■■□□□ 1
Cpt1aP97742 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC21.32■■□□□ 1
Cpt1aP97742 Gm43592-201ENSMUST00000196922 1165 ntBASIC21.32■■□□□ 1
Cpt1aP97742 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Cpt1aP97742 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Cpt1aP97742 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Cpt1aP97742 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC21.31■■□□□ 1
Cpt1aP97742 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Cpt1aP97742 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC21.3■■□□□ 1
Cpt1aP97742 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Cpt1aP97742 Gm5921-201ENSMUST00000075898 882 ntBASIC21.3■■□□□ 1
Cpt1aP97742 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC21.3■■□□□ 1
Cpt1aP97742 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Cpt1aP97742 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC21.3■■□□□ 1
Cpt1aP97742 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Cpt1aP97742 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC21.29■■□□□ 1
Cpt1aP97742 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC21.29■■□□□ 1
Cpt1aP97742 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Cpt1aP97742 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
Cpt1aP97742 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC21.29■■□□□ 1
Cpt1aP97742 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC21.29■■□□□ 1
Cpt1aP97742 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC21.28■■□□□ 1
Cpt1aP97742 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
Cpt1aP97742 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Cpt1aP97742 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC21.28■■□□□ 1
Cpt1aP97742 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Cpt1aP97742 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Cpt1aP97742 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC21.28■■□□□ 1
Cpt1aP97742 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
Cpt1aP97742 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Cpt1aP97742 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC21.27■■□□□ 1
Cpt1aP97742 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
Cpt1aP97742 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Cpt1aP97742 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Cpt1aP97742 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
Cpt1aP97742 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC21.26■□□□□ 0.99
Cpt1aP97742 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Cpt1aP97742 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC21.26■□□□□ 0.99
Cpt1aP97742 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC21.26■□□□□ 0.99
Cpt1aP97742 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Cpt1aP97742 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Cpt1aP97742 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Cpt1aP97742 Gm28731-201ENSMUST00000185564 1569 ntBASIC21.24■□□□□ 0.99
Cpt1aP97742 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Cpt1aP97742 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Cpt1aP97742 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
Cpt1aP97742 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Cpt1aP97742 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Retrieved 100 of 76,532 protein–RNA pairs in 16.1 ms