Protein–RNA interactions for Protein: P82350

Sgca, Alpha-sarcoglycan, mousemouse

Predictions only

Length 387 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcaP82350 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SgcaP82350 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
SgcaP82350 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
SgcaP82350 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SgcaP82350 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SgcaP82350 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
SgcaP82350 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SgcaP82350 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
SgcaP82350 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
SgcaP82350 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
SgcaP82350 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC18.28■□□□□ 0.52
SgcaP82350 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
SgcaP82350 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
SgcaP82350 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.51
SgcaP82350 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC18.26■□□□□ 0.51
SgcaP82350 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SgcaP82350 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
SgcaP82350 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
SgcaP82350 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
SgcaP82350 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC18.26■□□□□ 0.51
SgcaP82350 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SgcaP82350 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC18.26■□□□□ 0.51
SgcaP82350 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
SgcaP82350 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC18.25■□□□□ 0.51
SgcaP82350 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SgcaP82350 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
SgcaP82350 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
SgcaP82350 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SgcaP82350 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC18.25■□□□□ 0.51
SgcaP82350 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
SgcaP82350 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SgcaP82350 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC18.24■□□□□ 0.51
SgcaP82350 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
SgcaP82350 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
SgcaP82350 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC18.24■□□□□ 0.51
SgcaP82350 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
SgcaP82350 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC18.24■□□□□ 0.51
SgcaP82350 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC18.24■□□□□ 0.51
SgcaP82350 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
SgcaP82350 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
SgcaP82350 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
SgcaP82350 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
SgcaP82350 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC18.23■□□□□ 0.51
SgcaP82350 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
SgcaP82350 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
SgcaP82350 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SgcaP82350 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SgcaP82350 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC18.21■□□□□ 0.51
SgcaP82350 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SgcaP82350 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC18.21■□□□□ 0.51
SgcaP82350 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
SgcaP82350 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SgcaP82350 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SgcaP82350 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SgcaP82350 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
SgcaP82350 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC18.2■□□□□ 0.5
SgcaP82350 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC18.2■□□□□ 0.5
SgcaP82350 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SgcaP82350 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SgcaP82350 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
SgcaP82350 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SgcaP82350 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
SgcaP82350 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
SgcaP82350 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SgcaP82350 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SgcaP82350 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC18.18■□□□□ 0.5
SgcaP82350 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SgcaP82350 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC18.17■□□□□ 0.5
SgcaP82350 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
SgcaP82350 Gm45855-201ENSMUST00000212546 880 ntBASIC18.17■□□□□ 0.5
SgcaP82350 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC18.17■□□□□ 0.5
SgcaP82350 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
SgcaP82350 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
SgcaP82350 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SgcaP82350 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
SgcaP82350 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
SgcaP82350 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SgcaP82350 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC18.16■□□□□ 0.5
SgcaP82350 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SgcaP82350 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
SgcaP82350 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC18.16■□□□□ 0.5
SgcaP82350 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
SgcaP82350 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC18.15■□□□□ 0.5
SgcaP82350 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
SgcaP82350 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SgcaP82350 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC18.15■□□□□ 0.5
SgcaP82350 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SgcaP82350 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
SgcaP82350 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
SgcaP82350 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SgcaP82350 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SgcaP82350 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SgcaP82350 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC18.13■□□□□ 0.49
SgcaP82350 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SgcaP82350 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
SgcaP82350 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
SgcaP82350 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC18.13■□□□□ 0.49
SgcaP82350 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SgcaP82350 Gm32051-202ENSMUST00000197905 2385 ntBASIC18.12■□□□□ 0.49
SgcaP82350 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 14.3 ms