Protein–RNA interactions for Protein: P61025

Cks1b, Cyclin-dependent kinases regulatory subunit 1, mousemouse

Predictions only

Length 79 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cks1bP61025 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
Cks1bP61025 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Cks1bP61025 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Cks1bP61025 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Cks1bP61025 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC15.47■□□□□ 0.07
Cks1bP61025 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC15.47■□□□□ 0.07
Cks1bP61025 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Cks1bP61025 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC15.47■□□□□ 0.07
Cks1bP61025 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Cks1bP61025 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
Cks1bP61025 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC15.47■□□□□ 0.07
Cks1bP61025 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Cks1bP61025 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Cks1bP61025 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Cks1bP61025 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Cks1bP61025 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Cks1bP61025 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Cks1bP61025 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Cks1bP61025 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Cks1bP61025 Gm24970-201ENSMUST00000175582 82 ntBASIC15.46■□□□□ 0.07
Cks1bP61025 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC15.46■□□□□ 0.07
Cks1bP61025 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.06
Cks1bP61025 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
Cks1bP61025 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Cks1bP61025 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Cks1bP61025 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Cks1bP61025 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Cks1bP61025 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC15.45■□□□□ 0.06
Cks1bP61025 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC15.45■□□□□ 0.06
Cks1bP61025 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC15.44■□□□□ 0.06
Cks1bP61025 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC15.44■□□□□ 0.06
Cks1bP61025 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Cks1bP61025 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Cks1bP61025 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC15.44■□□□□ 0.06
Cks1bP61025 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Cks1bP61025 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Cks1bP61025 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Cks1bP61025 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Cks1bP61025 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Cks1bP61025 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
Cks1bP61025 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Cks1bP61025 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Cks1bP61025 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Cks1bP61025 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Cks1bP61025 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC15.43■□□□□ 0.06
Cks1bP61025 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC15.43■□□□□ 0.06
Cks1bP61025 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
Cks1bP61025 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC15.43■□□□□ 0.06
Cks1bP61025 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
Cks1bP61025 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
Cks1bP61025 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC15.42■□□□□ 0.06
Cks1bP61025 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Cks1bP61025 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Cks1bP61025 Gm30023-201ENSMUST00000197970 889 ntBASIC15.42■□□□□ 0.06
Cks1bP61025 Gm9397-201ENSMUST00000200125 605 ntBASIC15.42■□□□□ 0.06
Cks1bP61025 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Cks1bP61025 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC15.42■□□□□ 0.06
Cks1bP61025 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Cks1bP61025 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Cks1bP61025 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
Cks1bP61025 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC15.41■□□□□ 0.06
Cks1bP61025 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Cks1bP61025 Tdp2-203ENSMUST00000223804 1136 ntBASIC15.41■□□□□ 0.06
Cks1bP61025 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC15.41■□□□□ 0.06
Cks1bP61025 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
Cks1bP61025 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Cks1bP61025 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
Cks1bP61025 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Cks1bP61025 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Cks1bP61025 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Cks1bP61025 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC15.4■□□□□ 0.06
Cks1bP61025 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Cks1bP61025 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
Cks1bP61025 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Cks1bP61025 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Cks1bP61025 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Cks1bP61025 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Cks1bP61025 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Cks1bP61025 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
Cks1bP61025 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC15.39■□□□□ 0.05
Cks1bP61025 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
Cks1bP61025 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC15.38■□□□□ 0.05
Cks1bP61025 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Cks1bP61025 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Cks1bP61025 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Cks1bP61025 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC15.38■□□□□ 0.05
Cks1bP61025 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Cks1bP61025 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
Cks1bP61025 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
Cks1bP61025 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Cks1bP61025 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Cks1bP61025 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC15.37■□□□□ 0.05
Cks1bP61025 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Cks1bP61025 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Cks1bP61025 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Cks1bP61025 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Cks1bP61025 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Cks1bP61025 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Cks1bP61025 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Cks1bP61025 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 12.2 ms