Protein–RNA interactions for Protein: P48540

Gdnf, Glial cell line-derived neurotrophic factor, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GdnfP48540 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
GdnfP48540 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
GdnfP48540 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
GdnfP48540 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
GdnfP48540 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
GdnfP48540 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
GdnfP48540 AC124392.1-201ENSMUST00000225172 5324 ntBASIC19.06■□□□□ 0.64
GdnfP48540 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
GdnfP48540 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
GdnfP48540 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
GdnfP48540 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
GdnfP48540 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC19.06■□□□□ 0.64
GdnfP48540 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
GdnfP48540 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
GdnfP48540 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
GdnfP48540 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
GdnfP48540 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
GdnfP48540 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
GdnfP48540 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
GdnfP48540 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
GdnfP48540 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
GdnfP48540 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
GdnfP48540 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
GdnfP48540 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
GdnfP48540 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
GdnfP48540 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
GdnfP48540 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
GdnfP48540 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC19.03■□□□□ 0.64
GdnfP48540 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC19.03■□□□□ 0.64
GdnfP48540 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
GdnfP48540 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
GdnfP48540 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
GdnfP48540 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC19.02■□□□□ 0.64
GdnfP48540 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.63
GdnfP48540 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
GdnfP48540 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
GdnfP48540 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
GdnfP48540 Gm4799-201ENSMUST00000095396 657 ntBASIC19.01■□□□□ 0.63
GdnfP48540 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
GdnfP48540 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
GdnfP48540 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC19.01■□□□□ 0.63
GdnfP48540 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
GdnfP48540 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
GdnfP48540 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC19■□□□□ 0.63
GdnfP48540 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
GdnfP48540 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC19■□□□□ 0.63
GdnfP48540 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
GdnfP48540 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC19■□□□□ 0.63
GdnfP48540 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
GdnfP48540 Gm4419-202ENSMUST00000226239 1431 ntBASIC19■□□□□ 0.63
GdnfP48540 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
GdnfP48540 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
GdnfP48540 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
GdnfP48540 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
GdnfP48540 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
GdnfP48540 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
GdnfP48540 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC18.98■□□□□ 0.63
GdnfP48540 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
GdnfP48540 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
GdnfP48540 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
GdnfP48540 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
GdnfP48540 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
GdnfP48540 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC18.97■□□□□ 0.63
GdnfP48540 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC18.97■□□□□ 0.63
GdnfP48540 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
GdnfP48540 Gm32051-202ENSMUST00000197905 2385 ntBASIC18.97■□□□□ 0.63
GdnfP48540 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC18.96■□□□□ 0.63
GdnfP48540 Gm13889-201ENSMUST00000099689 1386 ntBASIC18.96■□□□□ 0.63
GdnfP48540 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
GdnfP48540 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
GdnfP48540 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
GdnfP48540 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
GdnfP48540 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
GdnfP48540 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC18.96■□□□□ 0.63
GdnfP48540 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
GdnfP48540 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC18.96■□□□□ 0.63
GdnfP48540 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
GdnfP48540 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
GdnfP48540 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
GdnfP48540 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
GdnfP48540 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
GdnfP48540 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
GdnfP48540 AC167019.3-201ENSMUST00000228225 1266 ntBASIC18.95■□□□□ 0.62
GdnfP48540 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
GdnfP48540 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
GdnfP48540 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
GdnfP48540 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
GdnfP48540 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
GdnfP48540 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
GdnfP48540 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
GdnfP48540 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC18.94■□□□□ 0.62
GdnfP48540 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
GdnfP48540 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
GdnfP48540 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
GdnfP48540 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
GdnfP48540 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC18.93■□□□□ 0.62
GdnfP48540 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC18.93■□□□□ 0.62
GdnfP48540 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
GdnfP48540 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
GdnfP48540 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC18.92■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 36.2 ms