Protein–RNA interactions for Protein: P43680

Sox18, Transcription factor SOX-18, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox18P43680 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC21.13■□□□□ 0.97
Sox18P43680 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Sox18P43680 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Sox18P43680 Gm4419-202ENSMUST00000226239 1431 ntBASIC21.12■□□□□ 0.97
Sox18P43680 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Sox18P43680 Gm16464-201ENSMUST00000117815 1095 ntBASIC21.12■□□□□ 0.97
Sox18P43680 Appbp2os-202ENSMUST00000206972 447 ntBASIC21.12■□□□□ 0.97
Sox18P43680 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC21.12■□□□□ 0.97
Sox18P43680 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Sox18P43680 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Sox18P43680 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Sox18P43680 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Sox18P43680 Gm22238-201ENSMUST00000175222 88 ntBASIC21.11■□□□□ 0.97
Sox18P43680 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Sox18P43680 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
Sox18P43680 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Sox18P43680 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Sox18P43680 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Sox18P43680 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC21.1■□□□□ 0.97
Sox18P43680 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Sox18P43680 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
Sox18P43680 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Sox18P43680 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Sox18P43680 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
Sox18P43680 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Sox18P43680 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Sox18P43680 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Sox18P43680 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Sox18P43680 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Sox18P43680 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Sox18P43680 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC21.07■□□□□ 0.96
Sox18P43680 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Sox18P43680 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Sox18P43680 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Sox18P43680 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
Sox18P43680 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
Sox18P43680 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC21.07■□□□□ 0.96
Sox18P43680 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Sox18P43680 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Sox18P43680 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Sox18P43680 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
Sox18P43680 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
Sox18P43680 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Sox18P43680 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
Sox18P43680 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC21.05■□□□□ 0.96
Sox18P43680 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC21.05■□□□□ 0.96
Sox18P43680 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Sox18P43680 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC21.04■□□□□ 0.96
Sox18P43680 Gm12821-201ENSMUST00000120022 600 ntBASIC21.04■□□□□ 0.96
Sox18P43680 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
Sox18P43680 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Sox18P43680 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Sox18P43680 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Sox18P43680 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
Sox18P43680 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Sox18P43680 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Sox18P43680 Gm12922-201ENSMUST00000120626 809 ntBASIC21.03■□□□□ 0.96
Sox18P43680 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC21.03■□□□□ 0.96
Sox18P43680 AC122428.3-201ENSMUST00000215551 2290 ntBASIC21.03■□□□□ 0.96
Sox18P43680 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC21.03■□□□□ 0.96
Sox18P43680 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Sox18P43680 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC21.02■□□□□ 0.96
Sox18P43680 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Sox18P43680 AC140930.3-201ENSMUST00000222935 274 ntBASIC21.02■□□□□ 0.96
Sox18P43680 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Sox18P43680 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
Sox18P43680 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.95
Sox18P43680 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Sox18P43680 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC21.01■□□□□ 0.95
Sox18P43680 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Sox18P43680 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC21.01■□□□□ 0.95
Sox18P43680 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Sox18P43680 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC21■□□□□ 0.95
Sox18P43680 Flvcr1-202ENSMUST00000191946 1216 ntBASIC21■□□□□ 0.95
Sox18P43680 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Sox18P43680 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC21■□□□□ 0.95
Sox18P43680 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
Sox18P43680 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC21■□□□□ 0.95
Sox18P43680 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC21■□□□□ 0.95
Sox18P43680 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Sox18P43680 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Sox18P43680 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC20.99■□□□□ 0.95
Sox18P43680 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC20.99■□□□□ 0.95
Sox18P43680 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
Sox18P43680 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Sox18P43680 Gm27454-201ENSMUST00000185090 204 ntBASIC20.98■□□□□ 0.95
Sox18P43680 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC20.97■□□□□ 0.95
Sox18P43680 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC20.97■□□□□ 0.95
Sox18P43680 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC20.97■□□□□ 0.95
Sox18P43680 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Sox18P43680 AC153890.1-201ENSMUST00000220021 2469 ntBASIC20.96■□□□□ 0.95
Sox18P43680 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Sox18P43680 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Sox18P43680 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC20.96■□□□□ 0.95
Sox18P43680 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.95
Sox18P43680 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Sox18P43680 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Sox18P43680 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
Sox18P43680 Gm40881-201ENSMUST00000223397 166 ntBASIC20.95■□□□□ 0.94
Sox18P43680 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Retrieved 100 of 76,532 protein–RNA pairs in 175.6 ms