Protein–RNA interactions for Protein: P43275

Hist1h1a, Histone H1.1, mousemouse

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hist1h1aP43275 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Hist1h1aP43275 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Hist1h1aP43275 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Hist1h1aP43275 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Hist1h1aP43275 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Hist1h1aP43275 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
Hist1h1aP43275 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC18■□□□□ 0.47
Hist1h1aP43275 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Hist1h1aP43275 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
Hist1h1aP43275 Gm26766-202ENSMUST00000227544 2347 ntBASIC17.99■□□□□ 0.47
Hist1h1aP43275 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Hist1h1aP43275 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC17.98■□□□□ 0.47
Hist1h1aP43275 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Hist1h1aP43275 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Hist1h1aP43275 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Hist1h1aP43275 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Hist1h1aP43275 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC17.97■□□□□ 0.47
Hist1h1aP43275 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Hist1h1aP43275 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC17.96■□□□□ 0.47
Hist1h1aP43275 Gm4799-201ENSMUST00000095396 657 ntBASIC17.96■□□□□ 0.47
Hist1h1aP43275 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC17.96■□□□□ 0.47
Hist1h1aP43275 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Hist1h1aP43275 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Hist1h1aP43275 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Hist1h1aP43275 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC17.95■□□□□ 0.46
Hist1h1aP43275 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Hist1h1aP43275 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Hist1h1aP43275 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC17.95■□□□□ 0.46
Hist1h1aP43275 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC17.95■□□□□ 0.46
Hist1h1aP43275 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Hist1h1aP43275 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC17.95■□□□□ 0.46
Hist1h1aP43275 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC17.95■□□□□ 0.46
Hist1h1aP43275 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
Hist1h1aP43275 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Hist1h1aP43275 Gm13889-201ENSMUST00000099689 1386 ntBASIC17.94■□□□□ 0.46
Hist1h1aP43275 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Hist1h1aP43275 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Hist1h1aP43275 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Hist1h1aP43275 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Hist1h1aP43275 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC17.94■□□□□ 0.46
Hist1h1aP43275 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
Hist1h1aP43275 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC17.94■□□□□ 0.46
Hist1h1aP43275 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
Hist1h1aP43275 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Hist1h1aP43275 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Hist1h1aP43275 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Hist1h1aP43275 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Hist1h1aP43275 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Hist1h1aP43275 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
Hist1h1aP43275 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Hist1h1aP43275 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Hist1h1aP43275 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Hist1h1aP43275 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Hist1h1aP43275 Gm38160-201ENSMUST00000193090 2499 ntBASIC17.92■□□□□ 0.46
Hist1h1aP43275 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Hist1h1aP43275 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Hist1h1aP43275 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Hist1h1aP43275 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
Hist1h1aP43275 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Hist1h1aP43275 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Hist1h1aP43275 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Hist1h1aP43275 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Hist1h1aP43275 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Hist1h1aP43275 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
Hist1h1aP43275 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Hist1h1aP43275 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
Hist1h1aP43275 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Hist1h1aP43275 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
Hist1h1aP43275 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC17.9■□□□□ 0.46
Hist1h1aP43275 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
Hist1h1aP43275 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Hist1h1aP43275 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
Hist1h1aP43275 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Hist1h1aP43275 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC17.89■□□□□ 0.45
Hist1h1aP43275 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Hist1h1aP43275 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
Hist1h1aP43275 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
Hist1h1aP43275 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Hist1h1aP43275 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Hist1h1aP43275 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Hist1h1aP43275 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC17.88■□□□□ 0.45
Hist1h1aP43275 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Hist1h1aP43275 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC17.87■□□□□ 0.45
Hist1h1aP43275 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Hist1h1aP43275 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Hist1h1aP43275 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Hist1h1aP43275 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Hist1h1aP43275 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Hist1h1aP43275 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
Hist1h1aP43275 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
Hist1h1aP43275 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Hist1h1aP43275 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Hist1h1aP43275 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Hist1h1aP43275 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Hist1h1aP43275 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC17.86■□□□□ 0.45
Hist1h1aP43275 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Hist1h1aP43275 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Hist1h1aP43275 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Hist1h1aP43275 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Hist1h1aP43275 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 14.6 ms