Protein–RNA interactions for Protein: P28660

Nckap1, Nck-associated protein 1, mousemouse

Known RBP Predictions only

Length 1,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nckap1P28660 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Nckap1P28660 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
Nckap1P28660 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
Nckap1P28660 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Nckap1P28660 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
Nckap1P28660 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Nckap1P28660 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Nckap1P28660 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC21.84■■□□□ 1.09
Nckap1P28660 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Nckap1P28660 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC21.84■■□□□ 1.09
Nckap1P28660 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Nckap1P28660 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.09
Nckap1P28660 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC21.83■■□□□ 1.09
Nckap1P28660 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
Nckap1P28660 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC21.83■■□□□ 1.09
Nckap1P28660 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC21.83■■□□□ 1.09
Nckap1P28660 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Nckap1P28660 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC21.83■■□□□ 1.09
Nckap1P28660 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
Nckap1P28660 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.08
Nckap1P28660 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.08
Nckap1P28660 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
Nckap1P28660 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.08
Nckap1P28660 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Nckap1P28660 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC21.82■■□□□ 1.08
Nckap1P28660 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Nckap1P28660 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC21.82■■□□□ 1.08
Nckap1P28660 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
Nckap1P28660 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Nckap1P28660 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC21.81■■□□□ 1.08
Nckap1P28660 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Nckap1P28660 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Nckap1P28660 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC21.81■■□□□ 1.08
Nckap1P28660 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
Nckap1P28660 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Nckap1P28660 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Nckap1P28660 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Nckap1P28660 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC21.81■■□□□ 1.08
Nckap1P28660 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Nckap1P28660 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Nckap1P28660 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC21.8■■□□□ 1.08
Nckap1P28660 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC21.79■■□□□ 1.08
Nckap1P28660 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Nckap1P28660 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC21.79■■□□□ 1.08
Nckap1P28660 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Nckap1P28660 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Nckap1P28660 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Nckap1P28660 Gm10232-201ENSMUST00000089221 720 ntBASIC21.78■■□□□ 1.08
Nckap1P28660 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC21.78■■□□□ 1.08
Nckap1P28660 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Nckap1P28660 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC21.77■■□□□ 1.08
Nckap1P28660 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Nckap1P28660 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Nckap1P28660 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC21.77■■□□□ 1.08
Nckap1P28660 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Nckap1P28660 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Nckap1P28660 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Nckap1P28660 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
Nckap1P28660 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC21.77■■□□□ 1.07
Nckap1P28660 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
Nckap1P28660 Gm45102-201ENSMUST00000207427 857 ntBASIC21.76■■□□□ 1.07
Nckap1P28660 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Nckap1P28660 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC21.76■■□□□ 1.07
Nckap1P28660 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Nckap1P28660 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
Nckap1P28660 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Nckap1P28660 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC21.75■■□□□ 1.07
Nckap1P28660 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Nckap1P28660 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Nckap1P28660 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC21.74■■□□□ 1.07
Nckap1P28660 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC21.74■■□□□ 1.07
Nckap1P28660 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Nckap1P28660 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Nckap1P28660 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Nckap1P28660 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Nckap1P28660 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC21.73■■□□□ 1.07
Nckap1P28660 Gm14117-201ENSMUST00000122417 843 ntBASIC21.73■■□□□ 1.07
Nckap1P28660 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC21.73■■□□□ 1.07
Nckap1P28660 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Nckap1P28660 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Nckap1P28660 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Nckap1P28660 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC21.72■■□□□ 1.07
Nckap1P28660 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Nckap1P28660 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC21.72■■□□□ 1.07
Nckap1P28660 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Nckap1P28660 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC21.71■■□□□ 1.07
Nckap1P28660 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Nckap1P28660 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC21.71■■□□□ 1.07
Nckap1P28660 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC21.71■■□□□ 1.07
Nckap1P28660 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Nckap1P28660 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC21.7■■□□□ 1.06
Nckap1P28660 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC21.7■■□□□ 1.06
Nckap1P28660 Gm9959-201ENSMUST00000068277 390 ntBASIC21.7■■□□□ 1.06
Nckap1P28660 AC153524.1-201ENSMUST00000220436 1935 ntBASIC21.7■■□□□ 1.06
Nckap1P28660 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Nckap1P28660 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC21.7■■□□□ 1.06
Nckap1P28660 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
Nckap1P28660 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Nckap1P28660 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC21.69■■□□□ 1.06
Nckap1P28660 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC21.69■■□□□ 1.06
Retrieved 100 of 76,532 protein–RNA pairs in 13.6 ms