Protein–RNA interactions for Protein: P25318

Col8a2, Collagen alpha-2(VIII) chain, mousemouse

Predictions only

Length 699 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a2P25318 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Col8a2P25318 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Col8a2P25318 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
Col8a2P25318 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Col8a2P25318 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC18.41■□□□□ 0.54
Col8a2P25318 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Col8a2P25318 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Col8a2P25318 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC18.41■□□□□ 0.54
Col8a2P25318 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Col8a2P25318 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Col8a2P25318 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
Col8a2P25318 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Col8a2P25318 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC18.4■□□□□ 0.54
Col8a2P25318 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC18.4■□□□□ 0.54
Col8a2P25318 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Col8a2P25318 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Col8a2P25318 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
Col8a2P25318 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Col8a2P25318 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Col8a2P25318 Il17rd-202ENSMUST00000223942 2186 ntBASIC18.4■□□□□ 0.54
Col8a2P25318 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.54
Col8a2P25318 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC18.39■□□□□ 0.54
Col8a2P25318 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.54
Col8a2P25318 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC18.39■□□□□ 0.53
Col8a2P25318 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
Col8a2P25318 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Col8a2P25318 Gm5921-201ENSMUST00000075898 882 ntBASIC18.38■□□□□ 0.53
Col8a2P25318 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Col8a2P25318 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Col8a2P25318 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Col8a2P25318 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Col8a2P25318 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
Col8a2P25318 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC18.38■□□□□ 0.53
Col8a2P25318 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Col8a2P25318 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Col8a2P25318 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Col8a2P25318 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Col8a2P25318 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Col8a2P25318 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Col8a2P25318 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Col8a2P25318 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Col8a2P25318 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Col8a2P25318 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
Col8a2P25318 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC18.36■□□□□ 0.53
Col8a2P25318 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Col8a2P25318 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Col8a2P25318 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Col8a2P25318 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Col8a2P25318 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC18.35■□□□□ 0.53
Col8a2P25318 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Col8a2P25318 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC18.35■□□□□ 0.53
Col8a2P25318 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
Col8a2P25318 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
Col8a2P25318 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Col8a2P25318 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
Col8a2P25318 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
Col8a2P25318 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
Col8a2P25318 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
Col8a2P25318 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Col8a2P25318 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
Col8a2P25318 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Col8a2P25318 Nsd1-203ENSMUST00000224156 1149 ntBASIC18.34■□□□□ 0.53
Col8a2P25318 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC18.34■□□□□ 0.53
Col8a2P25318 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Col8a2P25318 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Col8a2P25318 AC117245.4-201ENSMUST00000217388 1646 ntBASIC18.34■□□□□ 0.53
Col8a2P25318 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Col8a2P25318 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
Col8a2P25318 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC18.33■□□□□ 0.53
Col8a2P25318 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Col8a2P25318 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
Col8a2P25318 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Col8a2P25318 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
Col8a2P25318 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
Col8a2P25318 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Col8a2P25318 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Col8a2P25318 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Col8a2P25318 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
Col8a2P25318 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Col8a2P25318 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Col8a2P25318 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Col8a2P25318 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Col8a2P25318 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Col8a2P25318 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Col8a2P25318 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Col8a2P25318 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Col8a2P25318 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Col8a2P25318 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Col8a2P25318 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC18.31■□□□□ 0.52
Col8a2P25318 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Col8a2P25318 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Col8a2P25318 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
Col8a2P25318 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
Col8a2P25318 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Col8a2P25318 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Col8a2P25318 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
Col8a2P25318 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Col8a2P25318 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Col8a2P25318 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Col8a2P25318 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 31.9 ms