Protein–RNA interactions for Protein: P18608

Hmgn1, Non-histone chromosomal protein HMG-14, mousemouse

Known RBP Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgn1P18608 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
Hmgn1P18608 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Hmgn1P18608 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Hmgn1P18608 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Hmgn1P18608 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Hmgn1P18608 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Hmgn1P18608 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
Hmgn1P18608 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC20.06■□□□□ 0.8
Hmgn1P18608 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Hmgn1P18608 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Hmgn1P18608 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Hmgn1P18608 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Hmgn1P18608 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC20.05■□□□□ 0.8
Hmgn1P18608 Gm32051-202ENSMUST00000197905 2385 ntBASIC20.05■□□□□ 0.8
Hmgn1P18608 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
Hmgn1P18608 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Hmgn1P18608 AC131739.1-201ENSMUST00000221692 1245 ntBASIC20.04■□□□□ 0.8
Hmgn1P18608 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Hmgn1P18608 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Hmgn1P18608 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Hmgn1P18608 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Hmgn1P18608 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Hmgn1P18608 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
Hmgn1P18608 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
Hmgn1P18608 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Hmgn1P18608 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Hmgn1P18608 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Hmgn1P18608 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Hmgn1P18608 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
Hmgn1P18608 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Hmgn1P18608 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
Hmgn1P18608 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Hmgn1P18608 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Hmgn1P18608 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Hmgn1P18608 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Hmgn1P18608 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Hmgn1P18608 Gm38160-201ENSMUST00000193090 2499 ntBASIC20■□□□□ 0.79
Hmgn1P18608 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC20■□□□□ 0.79
Hmgn1P18608 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC20■□□□□ 0.79
Hmgn1P18608 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC20■□□□□ 0.79
Hmgn1P18608 AC153911.1-201ENSMUST00000220378 758 ntBASIC20■□□□□ 0.79
Hmgn1P18608 Gm9812-201ENSMUST00000061934 968 ntBASIC20■□□□□ 0.79
Hmgn1P18608 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC20■□□□□ 0.79
Hmgn1P18608 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC20■□□□□ 0.79
Hmgn1P18608 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Hmgn1P18608 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
Hmgn1P18608 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Hmgn1P18608 Gm7199-201ENSMUST00000118327 1485 ntBASIC19.99■□□□□ 0.79
Hmgn1P18608 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC19.99■□□□□ 0.79
Hmgn1P18608 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Hmgn1P18608 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Hmgn1P18608 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC19.99■□□□□ 0.79
Hmgn1P18608 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Hmgn1P18608 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Hmgn1P18608 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Hmgn1P18608 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Hmgn1P18608 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
Hmgn1P18608 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC19.98■□□□□ 0.79
Hmgn1P18608 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC19.98■□□□□ 0.79
Hmgn1P18608 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Hmgn1P18608 Gm9939-201ENSMUST00000067161 1154 ntBASIC19.98■□□□□ 0.79
Hmgn1P18608 Gm4799-201ENSMUST00000095396 657 ntBASIC19.98■□□□□ 0.79
Hmgn1P18608 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Hmgn1P18608 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Hmgn1P18608 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Hmgn1P18608 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
Hmgn1P18608 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Hmgn1P18608 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Hmgn1P18608 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Hmgn1P18608 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Hmgn1P18608 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Hmgn1P18608 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Hmgn1P18608 AC115037.1-201ENSMUST00000223391 2173 ntBASIC19.97■□□□□ 0.79
Hmgn1P18608 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Hmgn1P18608 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC19.96■□□□□ 0.79
Hmgn1P18608 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
Hmgn1P18608 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC19.96■□□□□ 0.79
Hmgn1P18608 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC19.96■□□□□ 0.79
Hmgn1P18608 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Hmgn1P18608 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Hmgn1P18608 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC19.95■□□□□ 0.78
Hmgn1P18608 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
Hmgn1P18608 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Hmgn1P18608 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC19.95■□□□□ 0.78
Hmgn1P18608 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Hmgn1P18608 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Hmgn1P18608 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Hmgn1P18608 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
Hmgn1P18608 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Hmgn1P18608 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Hmgn1P18608 AC153524.1-201ENSMUST00000220436 1935 ntBASIC19.94■□□□□ 0.78
Hmgn1P18608 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
Hmgn1P18608 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Hmgn1P18608 Gm6821-201ENSMUST00000107540 542 ntBASIC19.94■□□□□ 0.78
Hmgn1P18608 AC122317.2-201ENSMUST00000218708 1248 ntBASIC19.94■□□□□ 0.78
Hmgn1P18608 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC19.94■□□□□ 0.78
Hmgn1P18608 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Hmgn1P18608 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Hmgn1P18608 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Hmgn1P18608 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC19.93■□□□□ 0.78
Retrieved 100 of 76,532 protein–RNA pairs in 19.3 ms