Protein–RNA interactions for Protein: P08226

Apoe, Apolipoprotein E, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ApoeP08226 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
ApoeP08226 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
ApoeP08226 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
ApoeP08226 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
ApoeP08226 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC20.69■□□□□ 0.9
ApoeP08226 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
ApoeP08226 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
ApoeP08226 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
ApoeP08226 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
ApoeP08226 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
ApoeP08226 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
ApoeP08226 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
ApoeP08226 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
ApoeP08226 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
ApoeP08226 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
ApoeP08226 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
ApoeP08226 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
ApoeP08226 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
ApoeP08226 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
ApoeP08226 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
ApoeP08226 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
ApoeP08226 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
ApoeP08226 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
ApoeP08226 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
ApoeP08226 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
ApoeP08226 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC20.66■□□□□ 0.9
ApoeP08226 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC20.66■□□□□ 0.9
ApoeP08226 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
ApoeP08226 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
ApoeP08226 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
ApoeP08226 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
ApoeP08226 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
ApoeP08226 AC153524.1-201ENSMUST00000220436 1935 ntBASIC20.65■□□□□ 0.9
ApoeP08226 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC20.64■□□□□ 0.9
ApoeP08226 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
ApoeP08226 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC20.64■□□□□ 0.89
ApoeP08226 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC20.64■□□□□ 0.89
ApoeP08226 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
ApoeP08226 AC115037.1-201ENSMUST00000223391 2173 ntBASIC20.63■□□□□ 0.89
ApoeP08226 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
ApoeP08226 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
ApoeP08226 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
ApoeP08226 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC20.63■□□□□ 0.89
ApoeP08226 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
ApoeP08226 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC20.62■□□□□ 0.89
ApoeP08226 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
ApoeP08226 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC20.62■□□□□ 0.89
ApoeP08226 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
ApoeP08226 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
ApoeP08226 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
ApoeP08226 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
ApoeP08226 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
ApoeP08226 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
ApoeP08226 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
ApoeP08226 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
ApoeP08226 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
ApoeP08226 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
ApoeP08226 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
ApoeP08226 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
ApoeP08226 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
ApoeP08226 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC20.61■□□□□ 0.89
ApoeP08226 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
ApoeP08226 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC20.61■□□□□ 0.89
ApoeP08226 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
ApoeP08226 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC20.61■□□□□ 0.89
ApoeP08226 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
ApoeP08226 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC20.6■□□□□ 0.89
ApoeP08226 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
ApoeP08226 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
ApoeP08226 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
ApoeP08226 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
ApoeP08226 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
ApoeP08226 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
ApoeP08226 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
ApoeP08226 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
ApoeP08226 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
ApoeP08226 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
ApoeP08226 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC20.59■□□□□ 0.89
ApoeP08226 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
ApoeP08226 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC20.59■□□□□ 0.89
ApoeP08226 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC20.59■□□□□ 0.89
ApoeP08226 Gm13889-201ENSMUST00000099689 1386 ntBASIC20.59■□□□□ 0.89
ApoeP08226 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
ApoeP08226 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
ApoeP08226 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
ApoeP08226 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
ApoeP08226 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC20.58■□□□□ 0.88
ApoeP08226 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
ApoeP08226 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC20.58■□□□□ 0.88
ApoeP08226 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
ApoeP08226 Gm43006-201ENSMUST00000197702 1602 ntBASIC20.57■□□□□ 0.88
ApoeP08226 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC20.57■□□□□ 0.88
ApoeP08226 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
ApoeP08226 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
ApoeP08226 Gm7199-201ENSMUST00000118327 1485 ntBASIC20.56■□□□□ 0.88
ApoeP08226 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
ApoeP08226 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
ApoeP08226 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
ApoeP08226 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
ApoeP08226 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 92.1 ms