Protein–RNA interactions for Protein: P01758

Igh-VJ558, Ig heavy chain V region 108A, mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igh-VJ558P01758 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Igh-VJ558P01758 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
Igh-VJ558P01758 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Igh-VJ558P01758 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Igh-VJ558P01758 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Igh-VJ558P01758 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
Igh-VJ558P01758 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Igh-VJ558P01758 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
Igh-VJ558P01758 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Igh-VJ558P01758 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC19.09■□□□□ 0.65
Igh-VJ558P01758 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Igh-VJ558P01758 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Igh-VJ558P01758 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC19.09■□□□□ 0.65
Igh-VJ558P01758 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Igh-VJ558P01758 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Igh-VJ558P01758 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Igh-VJ558P01758 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
Igh-VJ558P01758 AC117245.4-201ENSMUST00000217388 1646 ntBASIC19.08■□□□□ 0.65
Igh-VJ558P01758 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC19.08■□□□□ 0.64
Igh-VJ558P01758 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Igh-VJ558P01758 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Igh-VJ558P01758 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Igh-VJ558P01758 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
Igh-VJ558P01758 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Igh-VJ558P01758 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC19.07■□□□□ 0.64
Igh-VJ558P01758 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Igh-VJ558P01758 AC117769.4-201ENSMUST00000225679 685 ntBASIC19.07■□□□□ 0.64
Igh-VJ558P01758 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Igh-VJ558P01758 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Igh-VJ558P01758 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
Igh-VJ558P01758 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC19.05■□□□□ 0.64
Igh-VJ558P01758 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Igh-VJ558P01758 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Igh-VJ558P01758 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC19.05■□□□□ 0.64
Igh-VJ558P01758 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
Igh-VJ558P01758 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Igh-VJ558P01758 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Igh-VJ558P01758 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Igh-VJ558P01758 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Igh-VJ558P01758 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
Igh-VJ558P01758 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Igh-VJ558P01758 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Igh-VJ558P01758 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
Igh-VJ558P01758 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Igh-VJ558P01758 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Igh-VJ558P01758 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
Igh-VJ558P01758 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Igh-VJ558P01758 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Igh-VJ558P01758 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Igh-VJ558P01758 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
Igh-VJ558P01758 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
Igh-VJ558P01758 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Igh-VJ558P01758 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
Igh-VJ558P01758 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Igh-VJ558P01758 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Igh-VJ558P01758 Gm5987-201ENSMUST00000196433 1151 ntBASIC19.01■□□□□ 0.63
Igh-VJ558P01758 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Igh-VJ558P01758 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC19■□□□□ 0.63
Igh-VJ558P01758 Gm11175-201ENSMUST00000116172 543 ntBASIC19■□□□□ 0.63
Igh-VJ558P01758 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC19■□□□□ 0.63
Igh-VJ558P01758 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC19■□□□□ 0.63
Igh-VJ558P01758 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Igh-VJ558P01758 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Igh-VJ558P01758 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Igh-VJ558P01758 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Igh-VJ558P01758 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC19■□□□□ 0.63
Igh-VJ558P01758 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Igh-VJ558P01758 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Igh-VJ558P01758 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Igh-VJ558P01758 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC18.99■□□□□ 0.63
Igh-VJ558P01758 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Igh-VJ558P01758 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Igh-VJ558P01758 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC18.98■□□□□ 0.63
Igh-VJ558P01758 AC115037.1-201ENSMUST00000223391 2173 ntBASIC18.98■□□□□ 0.63
Igh-VJ558P01758 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC18.97■□□□□ 0.63
Igh-VJ558P01758 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
Igh-VJ558P01758 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC18.97■□□□□ 0.63
Igh-VJ558P01758 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Igh-VJ558P01758 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Igh-VJ558P01758 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Igh-VJ558P01758 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Igh-VJ558P01758 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Igh-VJ558P01758 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Igh-VJ558P01758 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Igh-VJ558P01758 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Igh-VJ558P01758 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Igh-VJ558P01758 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
Igh-VJ558P01758 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC18.95■□□□□ 0.62
Igh-VJ558P01758 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Igh-VJ558P01758 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Igh-VJ558P01758 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC18.95■□□□□ 0.62
Igh-VJ558P01758 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Igh-VJ558P01758 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Igh-VJ558P01758 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
Igh-VJ558P01758 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Igh-VJ558P01758 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Igh-VJ558P01758 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Igh-VJ558P01758 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Igh-VJ558P01758 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
Igh-VJ558P01758 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 37.2 ms