Protein–RNA interactions for Protein: P01758

Igh-VJ558, Ig heavy chain V region 108A, mousemouse

Predictions only

Length 117 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igh-VJ558P01758 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Igh-VJ558P01758 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
Igh-VJ558P01758 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Igh-VJ558P01758 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Igh-VJ558P01758 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Igh-VJ558P01758 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
Igh-VJ558P01758 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Igh-VJ558P01758 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
Igh-VJ558P01758 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Igh-VJ558P01758 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC19.09■□□□□ 0.65
Igh-VJ558P01758 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Igh-VJ558P01758 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Igh-VJ558P01758 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC19.09■□□□□ 0.65
Igh-VJ558P01758 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Igh-VJ558P01758 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Igh-VJ558P01758 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Igh-VJ558P01758 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
Igh-VJ558P01758 AC117245.4-201ENSMUST00000217388 1646 ntBASIC19.08■□□□□ 0.65
Igh-VJ558P01758 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC19.08■□□□□ 0.64
Igh-VJ558P01758 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Igh-VJ558P01758 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Igh-VJ558P01758 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Igh-VJ558P01758 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
Igh-VJ558P01758 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Igh-VJ558P01758 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC19.07■□□□□ 0.64
Igh-VJ558P01758 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Igh-VJ558P01758 AC117769.4-201ENSMUST00000225679 685 ntBASIC19.07■□□□□ 0.64
Igh-VJ558P01758 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Igh-VJ558P01758 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Igh-VJ558P01758 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
Igh-VJ558P01758 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC19.05■□□□□ 0.64
Igh-VJ558P01758 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Igh-VJ558P01758 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Igh-VJ558P01758 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC19.05■□□□□ 0.64
Igh-VJ558P01758 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
Igh-VJ558P01758 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Igh-VJ558P01758 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Igh-VJ558P01758 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Igh-VJ558P01758 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Igh-VJ558P01758 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
Igh-VJ558P01758 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Igh-VJ558P01758 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Igh-VJ558P01758 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
Igh-VJ558P01758 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Igh-VJ558P01758 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Igh-VJ558P01758 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
Igh-VJ558P01758 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Igh-VJ558P01758 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Igh-VJ558P01758 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Igh-VJ558P01758 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
Igh-VJ558P01758 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
Igh-VJ558P01758 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Igh-VJ558P01758 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
Igh-VJ558P01758 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Igh-VJ558P01758 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Igh-VJ558P01758 Gm5987-201ENSMUST00000196433 1151 ntBASIC19.01■□□□□ 0.63
Igh-VJ558P01758 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Igh-VJ558P01758 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC19■□□□□ 0.63
Igh-VJ558P01758 Gm11175-201ENSMUST00000116172 543 ntBASIC19■□□□□ 0.63
Igh-VJ558P01758 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC19■□□□□ 0.63
Igh-VJ558P01758 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC19■□□□□ 0.63
Igh-VJ558P01758 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Igh-VJ558P01758 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Igh-VJ558P01758 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Igh-VJ558P01758 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Igh-VJ558P01758 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC19■□□□□ 0.63
Igh-VJ558P01758 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Igh-VJ558P01758 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Igh-VJ558P01758 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Igh-VJ558P01758 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC18.99■□□□□ 0.63
Igh-VJ558P01758 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Igh-VJ558P01758 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Igh-VJ558P01758 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC18.98■□□□□ 0.63
Igh-VJ558P01758 AC115037.1-201ENSMUST00000223391 2173 ntBASIC18.98■□□□□ 0.63
Igh-VJ558P01758 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC18.97■□□□□ 0.63
Igh-VJ558P01758 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
Igh-VJ558P01758 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC18.97■□□□□ 0.63
Igh-VJ558P01758 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Igh-VJ558P01758 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Igh-VJ558P01758 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Igh-VJ558P01758 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Igh-VJ558P01758 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Igh-VJ558P01758 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Igh-VJ558P01758 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Igh-VJ558P01758 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Igh-VJ558P01758 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Igh-VJ558P01758 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
Igh-VJ558P01758 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC18.95■□□□□ 0.62
Igh-VJ558P01758 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Igh-VJ558P01758 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Igh-VJ558P01758 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC18.95■□□□□ 0.62
Igh-VJ558P01758 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Igh-VJ558P01758 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Igh-VJ558P01758 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
Igh-VJ558P01758 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Igh-VJ558P01758 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Igh-VJ558P01758 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Igh-VJ558P01758 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Igh-VJ558P01758 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
Igh-VJ558P01758 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 17.9 ms