Protein–RNA interactions for Protein: O88935

Syn1, Synapsin-1, mousemouse

Predictions only

Length 706 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syn1O88935 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
Syn1O88935 Gm45417-201ENSMUST00000209533 758 ntBASIC22.87■■□□□ 1.25
Syn1O88935 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC22.87■■□□□ 1.25
Syn1O88935 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
Syn1O88935 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
Syn1O88935 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC22.86■■□□□ 1.25
Syn1O88935 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
Syn1O88935 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC22.85■■□□□ 1.25
Syn1O88935 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC22.85■■□□□ 1.25
Syn1O88935 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC22.85■■□□□ 1.25
Syn1O88935 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
Syn1O88935 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC22.85■■□□□ 1.25
Syn1O88935 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC22.84■■□□□ 1.25
Syn1O88935 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC22.84■■□□□ 1.25
Syn1O88935 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
Syn1O88935 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
Syn1O88935 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC22.83■■□□□ 1.25
Syn1O88935 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC22.83■■□□□ 1.25
Syn1O88935 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC22.83■■□□□ 1.25
Syn1O88935 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
Syn1O88935 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
Syn1O88935 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC22.83■■□□□ 1.25
Syn1O88935 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
Syn1O88935 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC22.82■■□□□ 1.24
Syn1O88935 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
Syn1O88935 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
Syn1O88935 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
Syn1O88935 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC22.81■■□□□ 1.24
Syn1O88935 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC22.81■■□□□ 1.24
Syn1O88935 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC22.81■■□□□ 1.24
Syn1O88935 Gm4419-202ENSMUST00000226239 1431 ntBASIC22.81■■□□□ 1.24
Syn1O88935 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
Syn1O88935 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC22.8■■□□□ 1.24
Syn1O88935 Gm12922-201ENSMUST00000120626 809 ntBASIC22.8■■□□□ 1.24
Syn1O88935 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC22.8■■□□□ 1.24
Syn1O88935 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC22.8■■□□□ 1.24
Syn1O88935 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC22.8■■□□□ 1.24
Syn1O88935 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC22.8■■□□□ 1.24
Syn1O88935 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
Syn1O88935 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
Syn1O88935 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
Syn1O88935 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC22.79■■□□□ 1.24
Syn1O88935 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC22.78■■□□□ 1.24
Syn1O88935 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
Syn1O88935 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
Syn1O88935 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC22.78■■□□□ 1.24
Syn1O88935 Gm29257-201ENSMUST00000186115 639 ntBASIC22.78■■□□□ 1.24
Syn1O88935 Gm8495-201ENSMUST00000188740 694 ntBASIC22.78■■□□□ 1.24
Syn1O88935 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC22.78■■□□□ 1.24
Syn1O88935 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC22.78■■□□□ 1.24
Syn1O88935 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC22.78■■□□□ 1.24
Syn1O88935 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC22.78■■□□□ 1.24
Syn1O88935 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
Syn1O88935 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC22.78■■□□□ 1.24
Syn1O88935 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC22.77■■□□□ 1.24
Syn1O88935 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC22.77■■□□□ 1.24
Syn1O88935 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC22.77■■□□□ 1.24
Syn1O88935 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
Syn1O88935 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
Syn1O88935 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC22.77■■□□□ 1.24
Syn1O88935 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC22.77■■□□□ 1.24
Syn1O88935 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC22.77■■□□□ 1.23
Syn1O88935 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
Syn1O88935 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
Syn1O88935 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC22.76■■□□□ 1.23
Syn1O88935 Gm40881-201ENSMUST00000223397 166 ntBASIC22.76■■□□□ 1.23
Syn1O88935 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC22.75■■□□□ 1.23
Syn1O88935 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC22.75■■□□□ 1.23
Syn1O88935 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC22.75■■□□□ 1.23
Syn1O88935 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC22.75■■□□□ 1.23
Syn1O88935 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC22.75■■□□□ 1.23
Syn1O88935 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC22.75■■□□□ 1.23
Syn1O88935 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC22.75■■□□□ 1.23
Syn1O88935 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC22.74■■□□□ 1.23
Syn1O88935 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC22.74■■□□□ 1.23
Syn1O88935 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC22.74■■□□□ 1.23
Syn1O88935 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
Syn1O88935 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC22.74■■□□□ 1.23
Syn1O88935 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
Syn1O88935 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
Syn1O88935 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC22.74■■□□□ 1.23
Syn1O88935 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC22.74■■□□□ 1.23
Syn1O88935 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
Syn1O88935 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC22.73■■□□□ 1.23
Syn1O88935 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
Syn1O88935 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC22.72■■□□□ 1.23
Syn1O88935 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
Syn1O88935 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
Syn1O88935 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC22.71■■□□□ 1.23
Syn1O88935 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC22.71■■□□□ 1.23
Syn1O88935 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
Syn1O88935 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
Syn1O88935 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
Syn1O88935 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC22.69■■□□□ 1.22
Syn1O88935 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
Syn1O88935 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Syn1O88935 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
Syn1O88935 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC22.68■■□□□ 1.22
Syn1O88935 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC22.68■■□□□ 1.22
Syn1O88935 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC22.68■■□□□ 1.22
Retrieved 100 of 76,532 protein–RNA pairs in 1695.5 ms