Protein–RNA interactions for Protein: O88890

Sh2d1a, SH2 domain-containing protein 1A, mousemouse

Predictions only

Length 126 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh2d1aO88890 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Sh2d1aO88890 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Sh2d1aO88890 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
Sh2d1aO88890 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
Sh2d1aO88890 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
Sh2d1aO88890 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Sh2d1aO88890 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Sh2d1aO88890 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Sh2d1aO88890 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Sh2d1aO88890 Gm9910-201ENSMUST00000195385 1550 ntBASIC15.39■□□□□ 0.05
Sh2d1aO88890 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Sh2d1aO88890 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
Sh2d1aO88890 Gm6934-201ENSMUST00000194780 1905 ntBASIC15.39■□□□□ 0.05
Sh2d1aO88890 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
Sh2d1aO88890 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Sh2d1aO88890 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Sh2d1aO88890 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Sh2d1aO88890 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Sh2d1aO88890 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
Sh2d1aO88890 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC15.38■□□□□ 0.05
Sh2d1aO88890 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
Sh2d1aO88890 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
Sh2d1aO88890 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Sh2d1aO88890 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Sh2d1aO88890 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC15.37■□□□□ 0.05
Sh2d1aO88890 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Sh2d1aO88890 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Sh2d1aO88890 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Sh2d1aO88890 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
Sh2d1aO88890 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Sh2d1aO88890 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Sh2d1aO88890 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Sh2d1aO88890 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Sh2d1aO88890 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC15.36■□□□□ 0.05
Sh2d1aO88890 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Sh2d1aO88890 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Sh2d1aO88890 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC15.36■□□□□ 0.05
Sh2d1aO88890 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Sh2d1aO88890 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC15.35■□□□□ 0.05
Sh2d1aO88890 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Sh2d1aO88890 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Sh2d1aO88890 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Sh2d1aO88890 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
Sh2d1aO88890 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
Sh2d1aO88890 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
Sh2d1aO88890 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
Sh2d1aO88890 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Sh2d1aO88890 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Sh2d1aO88890 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Sh2d1aO88890 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
Sh2d1aO88890 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC15.34■□□□□ 0.05
Sh2d1aO88890 Scarna2-201ENSMUST00000157560 414 ntBASIC15.34■□□□□ 0.05
Sh2d1aO88890 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Sh2d1aO88890 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Sh2d1aO88890 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Sh2d1aO88890 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Sh2d1aO88890 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC15.34■□□□□ 0.05
Sh2d1aO88890 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Sh2d1aO88890 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Sh2d1aO88890 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC15.34■□□□□ 0.05
Sh2d1aO88890 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Sh2d1aO88890 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC15.33■□□□□ 0.04
Sh2d1aO88890 Gm16437-201ENSMUST00000025669 507 ntBASIC15.33■□□□□ 0.04
Sh2d1aO88890 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Sh2d1aO88890 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Sh2d1aO88890 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Sh2d1aO88890 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Sh2d1aO88890 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Sh2d1aO88890 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Sh2d1aO88890 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Sh2d1aO88890 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC15.32■□□□□ 0.04
Sh2d1aO88890 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Sh2d1aO88890 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC15.32■□□□□ 0.04
Sh2d1aO88890 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Sh2d1aO88890 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Sh2d1aO88890 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Sh2d1aO88890 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Sh2d1aO88890 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Sh2d1aO88890 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Sh2d1aO88890 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Sh2d1aO88890 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Sh2d1aO88890 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Sh2d1aO88890 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC15.31■□□□□ 0.04
Sh2d1aO88890 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Sh2d1aO88890 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Sh2d1aO88890 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Sh2d1aO88890 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
Sh2d1aO88890 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Sh2d1aO88890 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Sh2d1aO88890 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC15.31■□□□□ 0.04
Sh2d1aO88890 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Sh2d1aO88890 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC15.3■□□□□ 0.04
Sh2d1aO88890 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC15.3■□□□□ 0.04
Sh2d1aO88890 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Sh2d1aO88890 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Sh2d1aO88890 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Sh2d1aO88890 Gm9806-201ENSMUST00000051080 552 ntBASIC15.3■□□□□ 0.04
Sh2d1aO88890 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Sh2d1aO88890 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Sh2d1aO88890 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 13.8 ms