Protein–RNA interactions for Protein: O88575

Slc6a20b, Sodium- and chloride-dependent transporter XTRP3B, mousemouse

Predictions only

Length 635 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a20bO88575 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
Slc6a20bO88575 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
Slc6a20bO88575 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC24.41■■□□□ 1.5
Slc6a20bO88575 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC24.41■■□□□ 1.5
Slc6a20bO88575 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC24.41■■□□□ 1.5
Slc6a20bO88575 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC24.4■■□□□ 1.5
Slc6a20bO88575 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC24.4■■□□□ 1.5
Slc6a20bO88575 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
Slc6a20bO88575 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
Slc6a20bO88575 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
Slc6a20bO88575 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC24.39■■□□□ 1.49
Slc6a20bO88575 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC24.38■■□□□ 1.49
Slc6a20bO88575 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
Slc6a20bO88575 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC24.38■■□□□ 1.49
Slc6a20bO88575 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC24.38■■□□□ 1.49
Slc6a20bO88575 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
Slc6a20bO88575 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
Slc6a20bO88575 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC24.37■■□□□ 1.49
Slc6a20bO88575 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
Slc6a20bO88575 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC24.36■■□□□ 1.49
Slc6a20bO88575 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
Slc6a20bO88575 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
Slc6a20bO88575 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
Slc6a20bO88575 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
Slc6a20bO88575 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC24.35■■□□□ 1.49
Slc6a20bO88575 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC24.35■■□□□ 1.49
Slc6a20bO88575 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
Slc6a20bO88575 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
Slc6a20bO88575 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
Slc6a20bO88575 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC24.35■■□□□ 1.49
Slc6a20bO88575 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC24.34■■□□□ 1.49
Slc6a20bO88575 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC24.34■■□□□ 1.49
Slc6a20bO88575 Gm5297-201ENSMUST00000198555 1171 ntBASIC24.34■■□□□ 1.49
Slc6a20bO88575 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
Slc6a20bO88575 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.48
Slc6a20bO88575 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.48
Slc6a20bO88575 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC24.32■■□□□ 1.48
Slc6a20bO88575 Gm40881-201ENSMUST00000223397 166 ntBASIC24.32■■□□□ 1.48
Slc6a20bO88575 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC24.32■■□□□ 1.48
Slc6a20bO88575 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
Slc6a20bO88575 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
Slc6a20bO88575 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
Slc6a20bO88575 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
Slc6a20bO88575 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
Slc6a20bO88575 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
Slc6a20bO88575 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC24.29■■□□□ 1.48
Slc6a20bO88575 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
Slc6a20bO88575 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC24.29■■□□□ 1.48
Slc6a20bO88575 Appbp2os-202ENSMUST00000206972 447 ntBASIC24.29■■□□□ 1.48
Slc6a20bO88575 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC24.29■■□□□ 1.48
Slc6a20bO88575 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
Slc6a20bO88575 Gm12922-201ENSMUST00000120626 809 ntBASIC24.28■■□□□ 1.48
Slc6a20bO88575 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC24.28■■□□□ 1.48
Slc6a20bO88575 AC140930.3-201ENSMUST00000222935 274 ntBASIC24.28■■□□□ 1.48
Slc6a20bO88575 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
Slc6a20bO88575 Gm28536-201ENSMUST00000190971 1317 ntBASIC24.28■■□□□ 1.48
Slc6a20bO88575 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC24.28■■□□□ 1.48
Slc6a20bO88575 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC24.28■■□□□ 1.48
Slc6a20bO88575 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC24.27■■□□□ 1.48
Slc6a20bO88575 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC24.27■■□□□ 1.48
Slc6a20bO88575 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC24.27■■□□□ 1.48
Slc6a20bO88575 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
Slc6a20bO88575 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
Slc6a20bO88575 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
Slc6a20bO88575 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
Slc6a20bO88575 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC24.26■■□□□ 1.47
Slc6a20bO88575 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC24.26■■□□□ 1.47
Slc6a20bO88575 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC24.25■■□□□ 1.47
Slc6a20bO88575 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
Slc6a20bO88575 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC24.25■■□□□ 1.47
Slc6a20bO88575 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC24.25■■□□□ 1.47
Slc6a20bO88575 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC24.25■■□□□ 1.47
Slc6a20bO88575 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
Slc6a20bO88575 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
Slc6a20bO88575 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC24.24■■□□□ 1.47
Slc6a20bO88575 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
Slc6a20bO88575 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
Slc6a20bO88575 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC24.23■■□□□ 1.47
Slc6a20bO88575 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
Slc6a20bO88575 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
Slc6a20bO88575 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
Slc6a20bO88575 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC24.22■■□□□ 1.47
Slc6a20bO88575 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
Slc6a20bO88575 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC24.22■■□□□ 1.47
Slc6a20bO88575 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
Slc6a20bO88575 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC24.21■■□□□ 1.47
Slc6a20bO88575 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
Slc6a20bO88575 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
Slc6a20bO88575 Gm12821-201ENSMUST00000120022 600 ntBASIC24.2■■□□□ 1.46
Slc6a20bO88575 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC24.2■■□□□ 1.46
Slc6a20bO88575 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC24.2■■□□□ 1.46
Slc6a20bO88575 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
Slc6a20bO88575 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC24.19■■□□□ 1.46
Slc6a20bO88575 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC24.19■■□□□ 1.46
Slc6a20bO88575 Gm27454-201ENSMUST00000185090 204 ntBASIC24.19■■□□□ 1.46
Slc6a20bO88575 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
Slc6a20bO88575 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC24.19■■□□□ 1.46
Slc6a20bO88575 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
Slc6a20bO88575 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC24.18■■□□□ 1.46
Slc6a20bO88575 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
Retrieved 100 of 76,532 protein–RNA pairs in 11.7 ms