Protein–RNA interactions for Protein: O88384

Vti1b, Vesicle transport through interaction with t-SNAREs homolog 1B, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vti1bO88384 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
Vti1bO88384 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Vti1bO88384 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
Vti1bO88384 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Vti1bO88384 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Vti1bO88384 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Vti1bO88384 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
Vti1bO88384 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Vti1bO88384 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
Vti1bO88384 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Vti1bO88384 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Vti1bO88384 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Vti1bO88384 Gm6934-201ENSMUST00000194780 1905 ntBASIC20.75■□□□□ 0.91
Vti1bO88384 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Vti1bO88384 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
Vti1bO88384 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC20.75■□□□□ 0.91
Vti1bO88384 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Vti1bO88384 Gm13042-201ENSMUST00000119244 1955 ntBASIC20.75■□□□□ 0.91
Vti1bO88384 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Vti1bO88384 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Vti1bO88384 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Vti1bO88384 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Vti1bO88384 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC20.74■□□□□ 0.91
Vti1bO88384 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Vti1bO88384 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Vti1bO88384 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Vti1bO88384 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Vti1bO88384 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
Vti1bO88384 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Vti1bO88384 AC153911.1-201ENSMUST00000220378 758 ntBASIC20.72■□□□□ 0.91
Vti1bO88384 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Vti1bO88384 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Vti1bO88384 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
Vti1bO88384 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Vti1bO88384 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Vti1bO88384 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
Vti1bO88384 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Vti1bO88384 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
Vti1bO88384 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Vti1bO88384 Dmtn-209ENSMUST00000228295 2572 ntBASIC20.71■□□□□ 0.91
Vti1bO88384 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Vti1bO88384 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Vti1bO88384 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC20.7■□□□□ 0.91
Vti1bO88384 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Vti1bO88384 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Vti1bO88384 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Vti1bO88384 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Vti1bO88384 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Vti1bO88384 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Vti1bO88384 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC20.69■□□□□ 0.9
Vti1bO88384 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
Vti1bO88384 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC20.69■□□□□ 0.9
Vti1bO88384 Gm6277-202ENSMUST00000224036 2779 ntBASIC20.69■□□□□ 0.9
Vti1bO88384 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
Vti1bO88384 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
Vti1bO88384 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
Vti1bO88384 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
Vti1bO88384 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Vti1bO88384 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Vti1bO88384 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Vti1bO88384 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Vti1bO88384 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Vti1bO88384 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Vti1bO88384 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC20.68■□□□□ 0.9
Vti1bO88384 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
Vti1bO88384 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
Vti1bO88384 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Vti1bO88384 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC20.67■□□□□ 0.9
Vti1bO88384 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Vti1bO88384 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC20.67■□□□□ 0.9
Vti1bO88384 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Vti1bO88384 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Vti1bO88384 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC20.66■□□□□ 0.9
Vti1bO88384 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC20.66■□□□□ 0.9
Vti1bO88384 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Vti1bO88384 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Vti1bO88384 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Vti1bO88384 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Vti1bO88384 Gm20634-201ENSMUST00000090779 2956 ntBASIC20.65■□□□□ 0.9
Vti1bO88384 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Vti1bO88384 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
Vti1bO88384 Terc-201ENSMUST00000082862 423 ntBASIC20.65■□□□□ 0.9
Vti1bO88384 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Vti1bO88384 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC20.65■□□□□ 0.9
Vti1bO88384 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
Vti1bO88384 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
Vti1bO88384 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Vti1bO88384 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Vti1bO88384 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
Vti1bO88384 Gm26766-202ENSMUST00000227544 2347 ntBASIC20.64■□□□□ 0.89
Vti1bO88384 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Vti1bO88384 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC20.63■□□□□ 0.89
Vti1bO88384 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Vti1bO88384 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Vti1bO88384 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
Vti1bO88384 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Vti1bO88384 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Vti1bO88384 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Vti1bO88384 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Vti1bO88384 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 23.7 ms