Protein–RNA interactions for Protein: O70400

Pdlim1, PDZ and LIM domain protein 1, mousemouse

Predictions only

Length 327 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim1O70400 Gm22567-201ENSMUST00000175542 342 ntBASIC21.72■■□□□ 1.07
Pdlim1O70400 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Pdlim1O70400 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC21.72■■□□□ 1.07
Pdlim1O70400 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC21.72■■□□□ 1.07
Pdlim1O70400 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Pdlim1O70400 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Pdlim1O70400 Gm5067-201ENSMUST00000170449 1009 ntBASIC21.71■■□□□ 1.07
Pdlim1O70400 Gm43592-201ENSMUST00000196922 1165 ntBASIC21.71■■□□□ 1.07
Pdlim1O70400 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Pdlim1O70400 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC21.71■■□□□ 1.07
Pdlim1O70400 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
Pdlim1O70400 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.07
Pdlim1O70400 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC21.7■■□□□ 1.06
Pdlim1O70400 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Pdlim1O70400 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC21.7■■□□□ 1.06
Pdlim1O70400 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC21.7■■□□□ 1.06
Pdlim1O70400 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Pdlim1O70400 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Pdlim1O70400 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Pdlim1O70400 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Pdlim1O70400 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Pdlim1O70400 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Pdlim1O70400 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Pdlim1O70400 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Pdlim1O70400 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC21.69■■□□□ 1.06
Pdlim1O70400 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Pdlim1O70400 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC21.68■■□□□ 1.06
Pdlim1O70400 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC21.68■■□□□ 1.06
Pdlim1O70400 AC117245.4-201ENSMUST00000217388 1646 ntBASIC21.68■■□□□ 1.06
Pdlim1O70400 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC21.68■■□□□ 1.06
Pdlim1O70400 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Pdlim1O70400 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Pdlim1O70400 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC21.68■■□□□ 1.06
Pdlim1O70400 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC21.67■■□□□ 1.06
Pdlim1O70400 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Pdlim1O70400 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Pdlim1O70400 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Pdlim1O70400 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Pdlim1O70400 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Pdlim1O70400 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC21.66■■□□□ 1.06
Pdlim1O70400 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
Pdlim1O70400 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC21.66■■□□□ 1.06
Pdlim1O70400 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Pdlim1O70400 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC21.66■■□□□ 1.06
Pdlim1O70400 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Pdlim1O70400 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
Pdlim1O70400 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC21.65■■□□□ 1.06
Pdlim1O70400 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Pdlim1O70400 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC21.65■■□□□ 1.06
Pdlim1O70400 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC21.65■■□□□ 1.06
Pdlim1O70400 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC21.65■■□□□ 1.06
Pdlim1O70400 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Pdlim1O70400 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Pdlim1O70400 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Pdlim1O70400 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
Pdlim1O70400 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC21.64■■□□□ 1.05
Pdlim1O70400 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC21.64■■□□□ 1.05
Pdlim1O70400 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Pdlim1O70400 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
Pdlim1O70400 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Pdlim1O70400 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Pdlim1O70400 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
Pdlim1O70400 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Pdlim1O70400 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Pdlim1O70400 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Pdlim1O70400 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Pdlim1O70400 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Pdlim1O70400 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC21.62■■□□□ 1.05
Pdlim1O70400 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC21.62■■□□□ 1.05
Pdlim1O70400 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Pdlim1O70400 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Pdlim1O70400 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC21.61■■□□□ 1.05
Pdlim1O70400 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC21.61■■□□□ 1.05
Pdlim1O70400 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC21.61■■□□□ 1.05
Pdlim1O70400 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC21.61■■□□□ 1.05
Pdlim1O70400 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Pdlim1O70400 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Pdlim1O70400 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC21.6■■□□□ 1.05
Pdlim1O70400 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC21.6■■□□□ 1.05
Pdlim1O70400 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Pdlim1O70400 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Pdlim1O70400 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC21.6■■□□□ 1.05
Pdlim1O70400 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Pdlim1O70400 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC21.59■■□□□ 1.05
Pdlim1O70400 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Pdlim1O70400 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC21.58■■□□□ 1.05
Pdlim1O70400 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Pdlim1O70400 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC21.58■■□□□ 1.05
Pdlim1O70400 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Pdlim1O70400 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
Pdlim1O70400 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC21.57■■□□□ 1.04
Pdlim1O70400 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC21.57■■□□□ 1.04
Pdlim1O70400 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC21.57■■□□□ 1.04
Pdlim1O70400 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Pdlim1O70400 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Pdlim1O70400 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Pdlim1O70400 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC21.57■■□□□ 1.04
Pdlim1O70400 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Pdlim1O70400 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
Pdlim1O70400 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC21.56■■□□□ 1.04
Retrieved 100 of 76,532 protein–RNA pairs in 78.1 ms