Protein–RNA interactions for Protein: O55240

Rdh5, 11-cis retinol dehydrogenase, mousemouse

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rdh5O55240 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Rdh5O55240 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Rdh5O55240 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Rdh5O55240 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
Rdh5O55240 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Rdh5O55240 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Rdh5O55240 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Rdh5O55240 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC20.7■□□□□ 0.9
Rdh5O55240 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC20.7■□□□□ 0.9
Rdh5O55240 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
Rdh5O55240 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Rdh5O55240 AC117769.4-201ENSMUST00000225679 685 ntBASIC20.7■□□□□ 0.9
Rdh5O55240 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Rdh5O55240 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
Rdh5O55240 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
Rdh5O55240 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC20.69■□□□□ 0.9
Rdh5O55240 Gm12366-201ENSMUST00000121722 873 ntBASIC20.69■□□□□ 0.9
Rdh5O55240 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC20.69■□□□□ 0.9
Rdh5O55240 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC20.69■□□□□ 0.9
Rdh5O55240 Gm5786-201ENSMUST00000085368 882 ntBASIC20.69■□□□□ 0.9
Rdh5O55240 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Rdh5O55240 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
Rdh5O55240 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Rdh5O55240 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Rdh5O55240 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Rdh5O55240 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Rdh5O55240 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Rdh5O55240 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Rdh5O55240 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Rdh5O55240 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
Rdh5O55240 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC20.67■□□□□ 0.9
Rdh5O55240 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Rdh5O55240 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Rdh5O55240 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Rdh5O55240 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
Rdh5O55240 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
Rdh5O55240 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
Rdh5O55240 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC20.66■□□□□ 0.9
Rdh5O55240 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Rdh5O55240 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Rdh5O55240 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Rdh5O55240 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
Rdh5O55240 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Rdh5O55240 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC20.65■□□□□ 0.9
Rdh5O55240 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC20.65■□□□□ 0.9
Rdh5O55240 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Rdh5O55240 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Rdh5O55240 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
Rdh5O55240 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Rdh5O55240 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC20.64■□□□□ 0.9
Rdh5O55240 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Rdh5O55240 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Rdh5O55240 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
Rdh5O55240 Gm27502-201ENSMUST00000183495 199 ntBASIC20.64■□□□□ 0.89
Rdh5O55240 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Rdh5O55240 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Rdh5O55240 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Rdh5O55240 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Rdh5O55240 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC20.64■□□□□ 0.89
Rdh5O55240 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Rdh5O55240 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Rdh5O55240 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Rdh5O55240 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC20.63■□□□□ 0.89
Rdh5O55240 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Rdh5O55240 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Rdh5O55240 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC20.63■□□□□ 0.89
Rdh5O55240 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Rdh5O55240 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Rdh5O55240 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC20.62■□□□□ 0.89
Rdh5O55240 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC20.62■□□□□ 0.89
Rdh5O55240 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Rdh5O55240 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Rdh5O55240 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
Rdh5O55240 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Rdh5O55240 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Rdh5O55240 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
Rdh5O55240 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Rdh5O55240 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Rdh5O55240 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC20.61■□□□□ 0.89
Rdh5O55240 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Rdh5O55240 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
Rdh5O55240 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
Rdh5O55240 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC20.61■□□□□ 0.89
Rdh5O55240 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Rdh5O55240 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Rdh5O55240 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Rdh5O55240 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Rdh5O55240 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Rdh5O55240 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
Rdh5O55240 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Rdh5O55240 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC20.59■□□□□ 0.89
Rdh5O55240 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
Rdh5O55240 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
Rdh5O55240 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Rdh5O55240 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
Rdh5O55240 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Rdh5O55240 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC20.59■□□□□ 0.89
Rdh5O55240 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Rdh5O55240 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Rdh5O55240 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 34 ms