Protein–RNA interactions for Protein: O35609

Scamp3, Secretory carrier-associated membrane protein 3, mousemouse

Predictions only

Length 349 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scamp3O35609 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Scamp3O35609 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Scamp3O35609 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Scamp3O35609 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Scamp3O35609 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Scamp3O35609 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Scamp3O35609 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Scamp3O35609 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Scamp3O35609 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Scamp3O35609 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Scamp3O35609 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
Scamp3O35609 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Scamp3O35609 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Scamp3O35609 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Scamp3O35609 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Scamp3O35609 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC21.72■■□□□ 1.07
Scamp3O35609 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Scamp3O35609 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC21.7■■□□□ 1.06
Scamp3O35609 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Scamp3O35609 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Scamp3O35609 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Scamp3O35609 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
Scamp3O35609 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC21.69■■□□□ 1.06
Scamp3O35609 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Scamp3O35609 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Scamp3O35609 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC21.68■■□□□ 1.06
Scamp3O35609 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
Scamp3O35609 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Scamp3O35609 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
Scamp3O35609 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Scamp3O35609 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Scamp3O35609 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC21.67■■□□□ 1.06
Scamp3O35609 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC21.67■■□□□ 1.06
Scamp3O35609 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC21.67■■□□□ 1.06
Scamp3O35609 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC21.67■■□□□ 1.06
Scamp3O35609 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC21.66■■□□□ 1.06
Scamp3O35609 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC21.66■■□□□ 1.06
Scamp3O35609 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Scamp3O35609 Gm43592-201ENSMUST00000196922 1165 ntBASIC21.66■■□□□ 1.06
Scamp3O35609 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Scamp3O35609 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC21.66■■□□□ 1.06
Scamp3O35609 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Scamp3O35609 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Scamp3O35609 AC153524.1-201ENSMUST00000220436 1935 ntBASIC21.65■■□□□ 1.06
Scamp3O35609 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Scamp3O35609 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC21.65■■□□□ 1.06
Scamp3O35609 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
Scamp3O35609 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Scamp3O35609 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Scamp3O35609 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC21.64■■□□□ 1.06
Scamp3O35609 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.05
Scamp3O35609 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC21.64■■□□□ 1.05
Scamp3O35609 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC21.64■■□□□ 1.05
Scamp3O35609 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
Scamp3O35609 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC21.63■■□□□ 1.05
Scamp3O35609 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Scamp3O35609 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Scamp3O35609 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Scamp3O35609 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Scamp3O35609 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Scamp3O35609 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC21.62■■□□□ 1.05
Scamp3O35609 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Scamp3O35609 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC21.62■■□□□ 1.05
Scamp3O35609 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC21.62■■□□□ 1.05
Scamp3O35609 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC21.62■■□□□ 1.05
Scamp3O35609 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC21.61■■□□□ 1.05
Scamp3O35609 Gm6934-201ENSMUST00000194780 1905 ntBASIC21.61■■□□□ 1.05
Scamp3O35609 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Scamp3O35609 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Scamp3O35609 Gm5921-201ENSMUST00000075898 882 ntBASIC21.61■■□□□ 1.05
Scamp3O35609 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Scamp3O35609 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC21.61■■□□□ 1.05
Scamp3O35609 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC21.61■■□□□ 1.05
Scamp3O35609 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Scamp3O35609 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Scamp3O35609 Il17rd-202ENSMUST00000223942 2186 ntBASIC21.6■■□□□ 1.05
Scamp3O35609 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Scamp3O35609 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Scamp3O35609 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC21.59■■□□□ 1.05
Scamp3O35609 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC21.59■■□□□ 1.05
Scamp3O35609 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC21.59■■□□□ 1.05
Scamp3O35609 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Scamp3O35609 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC21.59■■□□□ 1.05
Scamp3O35609 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Scamp3O35609 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Scamp3O35609 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
Scamp3O35609 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.05
Scamp3O35609 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC21.58■■□□□ 1.05
Scamp3O35609 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC21.58■■□□□ 1.05
Scamp3O35609 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC21.58■■□□□ 1.05
Scamp3O35609 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Scamp3O35609 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC21.58■■□□□ 1.05
Scamp3O35609 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Scamp3O35609 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
Scamp3O35609 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
Scamp3O35609 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
Scamp3O35609 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
Scamp3O35609 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC21.58■■□□□ 1.04
Scamp3O35609 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Scamp3O35609 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
Retrieved 100 of 76,532 protein–RNA pairs in 11.8 ms