Protein–RNA interactions for Protein: O35600

Abca4, Retinal-specific ATP-binding cassette transporter, mousemouse

Predictions only

Length 2,310 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abca4O35600 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Abca4O35600 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Abca4O35600 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC21.41■■□□□ 1.02
Abca4O35600 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC21.41■■□□□ 1.02
Abca4O35600 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Abca4O35600 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Abca4O35600 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Abca4O35600 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
Abca4O35600 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Abca4O35600 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Abca4O35600 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC21.39■■□□□ 1.01
Abca4O35600 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Abca4O35600 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Abca4O35600 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Abca4O35600 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC21.38■■□□□ 1.01
Abca4O35600 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Abca4O35600 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Abca4O35600 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC21.38■■□□□ 1.01
Abca4O35600 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Abca4O35600 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC21.37■■□□□ 1.01
Abca4O35600 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Abca4O35600 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC21.37■■□□□ 1.01
Abca4O35600 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
Abca4O35600 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Abca4O35600 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Abca4O35600 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Abca4O35600 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC21.37■■□□□ 1.01
Abca4O35600 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Abca4O35600 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Abca4O35600 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC21.36■■□□□ 1.01
Abca4O35600 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC21.36■■□□□ 1.01
Abca4O35600 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC21.35■■□□□ 1.01
Abca4O35600 Gm27011-201ENSMUST00000182352 972 ntBASIC21.35■■□□□ 1.01
Abca4O35600 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC21.35■■□□□ 1.01
Abca4O35600 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Abca4O35600 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC21.35■■□□□ 1.01
Abca4O35600 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC21.34■■□□□ 1.01
Abca4O35600 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Abca4O35600 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Abca4O35600 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC21.34■■□□□ 1.01
Abca4O35600 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC21.34■■□□□ 1.01
Abca4O35600 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC21.34■■□□□ 1.01
Abca4O35600 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC21.33■■□□□ 1
Abca4O35600 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Abca4O35600 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Abca4O35600 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC21.32■■□□□ 1
Abca4O35600 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC21.32■■□□□ 1
Abca4O35600 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC21.32■■□□□ 1
Abca4O35600 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC21.32■■□□□ 1
Abca4O35600 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC21.31■■□□□ 1
Abca4O35600 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Abca4O35600 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC21.31■■□□□ 1
Abca4O35600 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC21.31■■□□□ 1
Abca4O35600 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC21.31■■□□□ 1
Abca4O35600 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Abca4O35600 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC21.3■■□□□ 1
Abca4O35600 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC21.3■■□□□ 1
Abca4O35600 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC21.3■■□□□ 1
Abca4O35600 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC21.3■■□□□ 1
Abca4O35600 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC21.3■■□□□ 1
Abca4O35600 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC21.3■■□□□ 1
Abca4O35600 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC21.3■■□□□ 1
Abca4O35600 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC21.29■■□□□ 1
Abca4O35600 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC21.29■■□□□ 1
Abca4O35600 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Abca4O35600 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
Abca4O35600 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC21.29■■□□□ 1
Abca4O35600 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC21.29■■□□□ 1
Abca4O35600 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Abca4O35600 Gm5874-201ENSMUST00000096101 508 ntBASIC21.29■■□□□ 1
Abca4O35600 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC21.28■■□□□ 1
Abca4O35600 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Abca4O35600 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC21.28■■□□□ 1
Abca4O35600 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
Abca4O35600 Gm6139-201ENSMUST00000079261 882 ntBASIC21.27■■□□□ 1
Abca4O35600 Gm28536-201ENSMUST00000190971 1317 ntBASIC21.27■■□□□ 1
Abca4O35600 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC21.27■□□□□ 0.99
Abca4O35600 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
Abca4O35600 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
Abca4O35600 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC21.27■□□□□ 0.99
Abca4O35600 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC21.26■□□□□ 0.99
Abca4O35600 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC21.26■□□□□ 0.99
Abca4O35600 Gm40881-201ENSMUST00000223397 166 ntBASIC21.26■□□□□ 0.99
Abca4O35600 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Abca4O35600 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Abca4O35600 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Abca4O35600 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Abca4O35600 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC21.24■□□□□ 0.99
Abca4O35600 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Abca4O35600 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Abca4O35600 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC21.24■□□□□ 0.99
Abca4O35600 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC21.23■□□□□ 0.99
Abca4O35600 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Abca4O35600 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Abca4O35600 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC21.23■□□□□ 0.99
Abca4O35600 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Abca4O35600 Gm21168-201ENSMUST00000199646 1096 ntBASIC21.22■□□□□ 0.99
Abca4O35600 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC21.22■□□□□ 0.99
Abca4O35600 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Abca4O35600 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC21.22■□□□□ 0.99
Retrieved 100 of 76,532 protein–RNA pairs in 14.2 ms