Protein–RNA interactions for Protein: O09111

Ndufb11, NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 11, mitochondrial, mousemouse

Predictions only

Length 151 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ndufb11O09111 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC17.7■□□□□ 0.42
Ndufb11O09111 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ndufb11O09111 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
Ndufb11O09111 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ndufb11O09111 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ndufb11O09111 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
Ndufb11O09111 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC17.7■□□□□ 0.42
Ndufb11O09111 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ndufb11O09111 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ndufb11O09111 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ndufb11O09111 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ndufb11O09111 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ndufb11O09111 Gm4430-201ENSMUST00000192413 1943 ntBASIC17.68■□□□□ 0.42
Ndufb11O09111 AC153962.1-201ENSMUST00000218530 1948 ntBASIC17.68■□□□□ 0.42
Ndufb11O09111 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ndufb11O09111 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Ndufb11O09111 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ndufb11O09111 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Ndufb11O09111 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
Ndufb11O09111 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ndufb11O09111 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ndufb11O09111 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ndufb11O09111 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
Ndufb11O09111 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ndufb11O09111 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ndufb11O09111 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ndufb11O09111 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ndufb11O09111 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ndufb11O09111 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Ndufb11O09111 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ndufb11O09111 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ndufb11O09111 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ndufb11O09111 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC17.67■□□□□ 0.42
Ndufb11O09111 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Ndufb11O09111 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ndufb11O09111 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC17.66■□□□□ 0.42
Ndufb11O09111 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Ndufb11O09111 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ndufb11O09111 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Ndufb11O09111 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Ndufb11O09111 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ndufb11O09111 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Ndufb11O09111 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ndufb11O09111 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ndufb11O09111 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ndufb11O09111 Gm9910-201ENSMUST00000195385 1550 ntBASIC17.65■□□□□ 0.42
Ndufb11O09111 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ndufb11O09111 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ndufb11O09111 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Ndufb11O09111 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ndufb11O09111 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ndufb11O09111 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ndufb11O09111 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ndufb11O09111 Peli2-204ENSMUST00000226513 1320 ntBASIC17.64■□□□□ 0.41
Ndufb11O09111 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ndufb11O09111 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC17.64■□□□□ 0.41
Ndufb11O09111 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ndufb11O09111 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
Ndufb11O09111 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ndufb11O09111 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ndufb11O09111 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC17.62■□□□□ 0.41
Ndufb11O09111 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ndufb11O09111 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ndufb11O09111 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Ndufb11O09111 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Ndufb11O09111 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Ndufb11O09111 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Ndufb11O09111 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ndufb11O09111 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ndufb11O09111 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ndufb11O09111 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC17.61■□□□□ 0.41
Ndufb11O09111 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ndufb11O09111 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ndufb11O09111 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ndufb11O09111 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ndufb11O09111 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ndufb11O09111 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Ndufb11O09111 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ndufb11O09111 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Ndufb11O09111 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC17.6■□□□□ 0.41
Ndufb11O09111 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Ndufb11O09111 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
Ndufb11O09111 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ndufb11O09111 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ndufb11O09111 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ndufb11O09111 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ndufb11O09111 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Ndufb11O09111 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Ndufb11O09111 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ndufb11O09111 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
Ndufb11O09111 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Ndufb11O09111 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Ndufb11O09111 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Ndufb11O09111 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Ndufb11O09111 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Ndufb11O09111 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC17.58■□□□□ 0.4
Ndufb11O09111 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ndufb11O09111 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ndufb11O09111 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
Ndufb11O09111 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 1371.4 ms