Protein–RNA interactions for Protein: J3QP07

B020004C17Rik, RIKEN cDNA B020004C17 gene, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
B020004C17RikJ3QP07 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC25.15■■□□□ 1.62
B020004C17RikJ3QP07 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC25.15■■□□□ 1.62
B020004C17RikJ3QP07 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC25.15■■□□□ 1.62
B020004C17RikJ3QP07 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC25.14■■□□□ 1.62
B020004C17RikJ3QP07 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
B020004C17RikJ3QP07 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
B020004C17RikJ3QP07 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC25.13■■□□□ 1.61
B020004C17RikJ3QP07 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
B020004C17RikJ3QP07 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC25.11■■□□□ 1.61
B020004C17RikJ3QP07 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC25.11■■□□□ 1.61
B020004C17RikJ3QP07 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
B020004C17RikJ3QP07 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
B020004C17RikJ3QP07 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
B020004C17RikJ3QP07 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
B020004C17RikJ3QP07 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
B020004C17RikJ3QP07 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
B020004C17RikJ3QP07 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
B020004C17RikJ3QP07 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
B020004C17RikJ3QP07 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
B020004C17RikJ3QP07 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC25.08■■□□□ 1.61
B020004C17RikJ3QP07 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC25.08■■□□□ 1.61
B020004C17RikJ3QP07 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
B020004C17RikJ3QP07 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC25.08■■□□□ 1.61
B020004C17RikJ3QP07 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC25.08■■□□□ 1.61
B020004C17RikJ3QP07 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC25.08■■□□□ 1.61
B020004C17RikJ3QP07 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.6
B020004C17RikJ3QP07 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC25.08■■□□□ 1.6
B020004C17RikJ3QP07 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC25.07■■□□□ 1.6
B020004C17RikJ3QP07 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC25.06■■□□□ 1.6
B020004C17RikJ3QP07 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
B020004C17RikJ3QP07 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
B020004C17RikJ3QP07 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
B020004C17RikJ3QP07 Gm13241-201ENSMUST00000094493 780 ntBASIC25.05■■□□□ 1.6
B020004C17RikJ3QP07 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC25.05■■□□□ 1.6
B020004C17RikJ3QP07 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
B020004C17RikJ3QP07 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC25.04■■□□□ 1.6
B020004C17RikJ3QP07 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
B020004C17RikJ3QP07 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC25.04■■□□□ 1.6
B020004C17RikJ3QP07 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC25.04■■□□□ 1.6
B020004C17RikJ3QP07 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC25.04■■□□□ 1.6
B020004C17RikJ3QP07 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC25.03■■□□□ 1.6
B020004C17RikJ3QP07 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC25.03■■□□□ 1.6
B020004C17RikJ3QP07 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
B020004C17RikJ3QP07 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
B020004C17RikJ3QP07 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC25.02■■□□□ 1.6
B020004C17RikJ3QP07 Gm28536-201ENSMUST00000190971 1317 ntBASIC25.02■■□□□ 1.6
B020004C17RikJ3QP07 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
B020004C17RikJ3QP07 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
B020004C17RikJ3QP07 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC25.01■■□□□ 1.59
B020004C17RikJ3QP07 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC25.01■■□□□ 1.59
B020004C17RikJ3QP07 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC25.01■■□□□ 1.59
B020004C17RikJ3QP07 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC25.01■■□□□ 1.59
B020004C17RikJ3QP07 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC25■■□□□ 1.59
B020004C17RikJ3QP07 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC25■■□□□ 1.59
B020004C17RikJ3QP07 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
B020004C17RikJ3QP07 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
B020004C17RikJ3QP07 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC25■■□□□ 1.59
B020004C17RikJ3QP07 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
B020004C17RikJ3QP07 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC24.99■■□□□ 1.59
B020004C17RikJ3QP07 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC24.99■■□□□ 1.59
B020004C17RikJ3QP07 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
B020004C17RikJ3QP07 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC24.98■■□□□ 1.59
B020004C17RikJ3QP07 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
B020004C17RikJ3QP07 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC24.98■■□□□ 1.59
B020004C17RikJ3QP07 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC24.98■■□□□ 1.59
B020004C17RikJ3QP07 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC24.98■■□□□ 1.59
B020004C17RikJ3QP07 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC24.98■■□□□ 1.59
B020004C17RikJ3QP07 Gm40881-201ENSMUST00000223397 166 ntBASIC24.98■■□□□ 1.59
B020004C17RikJ3QP07 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
B020004C17RikJ3QP07 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC24.97■■□□□ 1.59
B020004C17RikJ3QP07 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
B020004C17RikJ3QP07 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC24.97■■□□□ 1.59
B020004C17RikJ3QP07 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC24.97■■□□□ 1.59
B020004C17RikJ3QP07 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
B020004C17RikJ3QP07 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
B020004C17RikJ3QP07 AC153524.1-201ENSMUST00000220436 1935 ntBASIC24.96■■□□□ 1.59
B020004C17RikJ3QP07 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
B020004C17RikJ3QP07 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC24.96■■□□□ 1.59
B020004C17RikJ3QP07 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.59
B020004C17RikJ3QP07 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC24.95■■□□□ 1.59
B020004C17RikJ3QP07 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC24.95■■□□□ 1.58
B020004C17RikJ3QP07 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
B020004C17RikJ3QP07 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC24.95■■□□□ 1.58
B020004C17RikJ3QP07 Gm22238-201ENSMUST00000175222 88 ntBASIC24.95■■□□□ 1.58
B020004C17RikJ3QP07 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC24.95■■□□□ 1.58
B020004C17RikJ3QP07 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC24.95■■□□□ 1.58
B020004C17RikJ3QP07 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC24.95■■□□□ 1.58
B020004C17RikJ3QP07 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
B020004C17RikJ3QP07 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
B020004C17RikJ3QP07 Gm43034-201ENSMUST00000198678 1364 ntBASIC24.94■■□□□ 1.58
B020004C17RikJ3QP07 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
B020004C17RikJ3QP07 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC24.94■■□□□ 1.58
B020004C17RikJ3QP07 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC24.94■■□□□ 1.58
B020004C17RikJ3QP07 Gm9847-201ENSMUST00000052528 599 ntBASIC24.94■■□□□ 1.58
B020004C17RikJ3QP07 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC24.93■■□□□ 1.58
B020004C17RikJ3QP07 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC24.93■■□□□ 1.58
B020004C17RikJ3QP07 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
B020004C17RikJ3QP07 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC24.93■■□□□ 1.58
B020004C17RikJ3QP07 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC24.93■■□□□ 1.58
B020004C17RikJ3QP07 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
Retrieved 100 of 76,532 protein–RNA pairs in 10.8 ms