Protein–RNA interactions for Protein: H3BJZ2

Cdhr4, Cadherin-related family member 4, mousemouse

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdhr4H3BJZ2 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Cdhr4H3BJZ2 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Cdhr4H3BJZ2 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cdhr4H3BJZ2 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cdhr4H3BJZ2 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC19.32■□□□□ 0.68
Cdhr4H3BJZ2 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cdhr4H3BJZ2 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cdhr4H3BJZ2 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC19.32■□□□□ 0.68
Cdhr4H3BJZ2 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC19.32■□□□□ 0.68
Cdhr4H3BJZ2 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Cdhr4H3BJZ2 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Cdhr4H3BJZ2 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC19.32■□□□□ 0.68
Cdhr4H3BJZ2 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cdhr4H3BJZ2 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cdhr4H3BJZ2 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Cdhr4H3BJZ2 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Cdhr4H3BJZ2 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
Cdhr4H3BJZ2 Gm15546-201ENSMUST00000122095 826 ntBASIC19.31■□□□□ 0.68
Cdhr4H3BJZ2 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Cdhr4H3BJZ2 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC19.3■□□□□ 0.68
Cdhr4H3BJZ2 Gm15820-201ENSMUST00000201566 728 ntBASIC19.3■□□□□ 0.68
Cdhr4H3BJZ2 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
Cdhr4H3BJZ2 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
Cdhr4H3BJZ2 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
Cdhr4H3BJZ2 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC19.29■□□□□ 0.68
Cdhr4H3BJZ2 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Cdhr4H3BJZ2 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Cdhr4H3BJZ2 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
Cdhr4H3BJZ2 Gm13238-201ENSMUST00000117655 780 ntBASIC19.29■□□□□ 0.68
Cdhr4H3BJZ2 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
Cdhr4H3BJZ2 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Cdhr4H3BJZ2 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Cdhr4H3BJZ2 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
Cdhr4H3BJZ2 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Cdhr4H3BJZ2 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Cdhr4H3BJZ2 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Cdhr4H3BJZ2 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Cdhr4H3BJZ2 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Cdhr4H3BJZ2 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Cdhr4H3BJZ2 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Cdhr4H3BJZ2 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Cdhr4H3BJZ2 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Cdhr4H3BJZ2 Gm5522-201ENSMUST00000189483 1242 ntBASIC19.27■□□□□ 0.68
Cdhr4H3BJZ2 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Cdhr4H3BJZ2 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC19.26■□□□□ 0.67
Cdhr4H3BJZ2 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Cdhr4H3BJZ2 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Cdhr4H3BJZ2 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
Cdhr4H3BJZ2 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC19.25■□□□□ 0.67
Cdhr4H3BJZ2 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC19.25■□□□□ 0.67
Cdhr4H3BJZ2 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Cdhr4H3BJZ2 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Cdhr4H3BJZ2 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Cdhr4H3BJZ2 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Cdhr4H3BJZ2 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Cdhr4H3BJZ2 Gm7199-201ENSMUST00000118327 1485 ntBASIC19.24■□□□□ 0.67
Cdhr4H3BJZ2 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Cdhr4H3BJZ2 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Cdhr4H3BJZ2 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC19.24■□□□□ 0.67
Cdhr4H3BJZ2 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
Cdhr4H3BJZ2 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC19.24■□□□□ 0.67
Cdhr4H3BJZ2 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
Cdhr4H3BJZ2 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Cdhr4H3BJZ2 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Cdhr4H3BJZ2 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
Cdhr4H3BJZ2 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Cdhr4H3BJZ2 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Cdhr4H3BJZ2 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Cdhr4H3BJZ2 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Cdhr4H3BJZ2 Gm45444-201ENSMUST00000211394 898 ntBASIC19.23■□□□□ 0.67
Cdhr4H3BJZ2 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Cdhr4H3BJZ2 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Cdhr4H3BJZ2 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Cdhr4H3BJZ2 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
Cdhr4H3BJZ2 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Cdhr4H3BJZ2 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cdhr4H3BJZ2 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cdhr4H3BJZ2 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cdhr4H3BJZ2 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cdhr4H3BJZ2 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Cdhr4H3BJZ2 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cdhr4H3BJZ2 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cdhr4H3BJZ2 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Cdhr4H3BJZ2 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
Cdhr4H3BJZ2 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
Cdhr4H3BJZ2 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Cdhr4H3BJZ2 Gm42699-201ENSMUST00000198104 1657 ntBASIC19.21■□□□□ 0.67
Cdhr4H3BJZ2 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC19.21■□□□□ 0.67
Cdhr4H3BJZ2 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
Cdhr4H3BJZ2 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC19.21■□□□□ 0.67
Cdhr4H3BJZ2 Il17rd-202ENSMUST00000223942 2186 ntBASIC19.21■□□□□ 0.67
Cdhr4H3BJZ2 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cdhr4H3BJZ2 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Cdhr4H3BJZ2 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Cdhr4H3BJZ2 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Cdhr4H3BJZ2 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC19.2■□□□□ 0.66
Cdhr4H3BJZ2 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Cdhr4H3BJZ2 Gm43566-201ENSMUST00000196851 808 ntBASIC19.2■□□□□ 0.66
Cdhr4H3BJZ2 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Cdhr4H3BJZ2 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 25.3 ms