Protein–RNA interactions for Protein: F6SW83

Gm10477, Predicted gene 10477, mousemouse

Predictions only

Length 55 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm10477F6SW83 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Gm10477F6SW83 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Gm10477F6SW83 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Gm10477F6SW83 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Gm10477F6SW83 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Gm10477F6SW83 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC20.4■□□□□ 0.86
Gm10477F6SW83 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Gm10477F6SW83 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC20.4■□□□□ 0.86
Gm10477F6SW83 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Gm10477F6SW83 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Gm10477F6SW83 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
Gm10477F6SW83 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Gm10477F6SW83 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
Gm10477F6SW83 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Gm10477F6SW83 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Gm10477F6SW83 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Gm10477F6SW83 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.85
Gm10477F6SW83 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Gm10477F6SW83 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
Gm10477F6SW83 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Gm10477F6SW83 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
Gm10477F6SW83 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Gm10477F6SW83 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Gm10477F6SW83 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Gm10477F6SW83 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Gm10477F6SW83 AC157572.2-201ENSMUST00000226970 908 ntBASIC20.38■□□□□ 0.85
Gm10477F6SW83 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Gm10477F6SW83 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Gm10477F6SW83 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
Gm10477F6SW83 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC20.37■□□□□ 0.85
Gm10477F6SW83 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Gm10477F6SW83 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Gm10477F6SW83 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC20.37■□□□□ 0.85
Gm10477F6SW83 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Gm10477F6SW83 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Gm10477F6SW83 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Gm10477F6SW83 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC20.36■□□□□ 0.85
Gm10477F6SW83 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Gm10477F6SW83 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
Gm10477F6SW83 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Gm10477F6SW83 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Gm10477F6SW83 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC20.36■□□□□ 0.85
Gm10477F6SW83 Gm43863-201ENSMUST00000203822 1192 ntBASIC20.35■□□□□ 0.85
Gm10477F6SW83 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Gm10477F6SW83 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
Gm10477F6SW83 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
Gm10477F6SW83 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Gm10477F6SW83 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Gm10477F6SW83 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC20.33■□□□□ 0.85
Gm10477F6SW83 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Gm10477F6SW83 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Gm10477F6SW83 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Gm10477F6SW83 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.84
Gm10477F6SW83 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.84
Gm10477F6SW83 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC20.33■□□□□ 0.84
Gm10477F6SW83 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Gm10477F6SW83 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
Gm10477F6SW83 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Gm10477F6SW83 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Gm10477F6SW83 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Gm10477F6SW83 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Gm10477F6SW83 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Gm10477F6SW83 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Gm10477F6SW83 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
Gm10477F6SW83 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC20.31■□□□□ 0.84
Gm10477F6SW83 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Gm10477F6SW83 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Gm10477F6SW83 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
Gm10477F6SW83 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Gm10477F6SW83 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Gm10477F6SW83 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
Gm10477F6SW83 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
Gm10477F6SW83 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC20.3■□□□□ 0.84
Gm10477F6SW83 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Gm10477F6SW83 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Gm10477F6SW83 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Gm10477F6SW83 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Gm10477F6SW83 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Gm10477F6SW83 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Gm10477F6SW83 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC20.29■□□□□ 0.84
Gm10477F6SW83 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Gm10477F6SW83 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Gm10477F6SW83 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Gm10477F6SW83 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC20.28■□□□□ 0.84
Gm10477F6SW83 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Gm10477F6SW83 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
Gm10477F6SW83 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
Gm10477F6SW83 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
Gm10477F6SW83 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
Gm10477F6SW83 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Gm10477F6SW83 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
Gm10477F6SW83 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Gm10477F6SW83 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Gm10477F6SW83 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
Gm10477F6SW83 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
Gm10477F6SW83 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC20.26■□□□□ 0.83
Gm10477F6SW83 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC20.26■□□□□ 0.83
Gm10477F6SW83 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
Gm10477F6SW83 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Gm10477F6SW83 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 16.7 ms