Protein–RNA interactions for Protein: E9PZM7

Scaf11, SR-related CTD-associated factor 11, mousemouse

Known RBP Predictions only

Length 1,456 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf11E9PZM7 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC31.51■■■□□ 2.63
Scaf11E9PZM7 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC31.51■■■□□ 2.63
Scaf11E9PZM7 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC31.5■■■□□ 2.63
Scaf11E9PZM7 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC31.48■■■□□ 2.63
Scaf11E9PZM7 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC31.48■■■□□ 2.63
Scaf11E9PZM7 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC31.47■■■□□ 2.63
Scaf11E9PZM7 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC31.47■■■□□ 2.63
Scaf11E9PZM7 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC31.47■■■□□ 2.63
Scaf11E9PZM7 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC31.47■■■□□ 2.63
Scaf11E9PZM7 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC31.47■■■□□ 2.63
Scaf11E9PZM7 Gm45417-201ENSMUST00000209533 758 ntBASIC31.46■■■□□ 2.63
Scaf11E9PZM7 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC31.46■■■□□ 2.63
Scaf11E9PZM7 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC31.46■■■□□ 2.63
Scaf11E9PZM7 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC31.46■■■□□ 2.63
Scaf11E9PZM7 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC31.46■■■□□ 2.63
Scaf11E9PZM7 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC31.45■■■□□ 2.63
Scaf11E9PZM7 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC31.45■■■□□ 2.63
Scaf11E9PZM7 Gm12821-201ENSMUST00000120022 600 ntBASIC31.45■■■□□ 2.62
Scaf11E9PZM7 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC31.45■■■□□ 2.62
Scaf11E9PZM7 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC31.45■■■□□ 2.62
Scaf11E9PZM7 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC31.44■■■□□ 2.62
Scaf11E9PZM7 Gm40881-201ENSMUST00000223397 166 ntBASIC31.44■■■□□ 2.62
Scaf11E9PZM7 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC31.44■■■□□ 2.62
Scaf11E9PZM7 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC31.43■■■□□ 2.62
Scaf11E9PZM7 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC31.42■■■□□ 2.62
Scaf11E9PZM7 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC31.42■■■□□ 2.62
Scaf11E9PZM7 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC31.42■■■□□ 2.62
Scaf11E9PZM7 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC31.41■■■□□ 2.62
Scaf11E9PZM7 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC31.4■■■□□ 2.62
Scaf11E9PZM7 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC31.4■■■□□ 2.62
Scaf11E9PZM7 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC31.39■■■□□ 2.62
Scaf11E9PZM7 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC31.39■■■□□ 2.62
Scaf11E9PZM7 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC31.39■■■□□ 2.62
Scaf11E9PZM7 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC31.38■■■□□ 2.61
Scaf11E9PZM7 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC31.38■■■□□ 2.61
Scaf11E9PZM7 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC31.37■■■□□ 2.61
Scaf11E9PZM7 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC31.36■■■□□ 2.61
Scaf11E9PZM7 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC31.36■■■□□ 2.61
Scaf11E9PZM7 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC31.36■■■□□ 2.61
Scaf11E9PZM7 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC31.36■■■□□ 2.61
Scaf11E9PZM7 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC31.36■■■□□ 2.61
Scaf11E9PZM7 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC31.36■■■□□ 2.61
Scaf11E9PZM7 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC31.36■■■□□ 2.61
Scaf11E9PZM7 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC31.36■■■□□ 2.61
Scaf11E9PZM7 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC31.35■■■□□ 2.61
Scaf11E9PZM7 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC31.35■■■□□ 2.61
Scaf11E9PZM7 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC31.35■■■□□ 2.61
Scaf11E9PZM7 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC31.35■■■□□ 2.61
Scaf11E9PZM7 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC31.34■■■□□ 2.61
Scaf11E9PZM7 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC31.33■■■□□ 2.61
Scaf11E9PZM7 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC31.33■■■□□ 2.61
Scaf11E9PZM7 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC31.33■■■□□ 2.61
Scaf11E9PZM7 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC31.33■■■□□ 2.61
Scaf11E9PZM7 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC31.33■■■□□ 2.61
Scaf11E9PZM7 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC31.33■■■□□ 2.61
Scaf11E9PZM7 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC31.32■■■□□ 2.6
Scaf11E9PZM7 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC31.32■■■□□ 2.6
Scaf11E9PZM7 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC31.32■■■□□ 2.6
Scaf11E9PZM7 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC31.32■■■□□ 2.6
Scaf11E9PZM7 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC31.31■■■□□ 2.6
Scaf11E9PZM7 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC31.31■■■□□ 2.6
Scaf11E9PZM7 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC31.31■■■□□ 2.6
Scaf11E9PZM7 Flvcr1-202ENSMUST00000191946 1216 ntBASIC31.31■■■□□ 2.6
Scaf11E9PZM7 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC31.31■■■□□ 2.6
Scaf11E9PZM7 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC31.31■■■□□ 2.6
Scaf11E9PZM7 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC31.31■■■□□ 2.6
Scaf11E9PZM7 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC31.3■■■□□ 2.6
Scaf11E9PZM7 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC31.3■■■□□ 2.6
Scaf11E9PZM7 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC31.3■■■□□ 2.6
Scaf11E9PZM7 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC31.3■■■□□ 2.6
Scaf11E9PZM7 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC31.3■■■□□ 2.6
Scaf11E9PZM7 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC31.29■■■□□ 2.6
Scaf11E9PZM7 Gm8495-201ENSMUST00000188740 694 ntBASIC31.27■■■□□ 2.6
Scaf11E9PZM7 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC31.27■■■□□ 2.6
Scaf11E9PZM7 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC31.27■■■□□ 2.6
Scaf11E9PZM7 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
Scaf11E9PZM7 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC31.27■■■□□ 2.6
Scaf11E9PZM7 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC31.27■■■□□ 2.6
Scaf11E9PZM7 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
Scaf11E9PZM7 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC31.26■■■□□ 2.59
Scaf11E9PZM7 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC31.26■■■□□ 2.59
Scaf11E9PZM7 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC31.26■■■□□ 2.59
Scaf11E9PZM7 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC31.25■■■□□ 2.59
Scaf11E9PZM7 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC31.25■■■□□ 2.59
Scaf11E9PZM7 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC31.25■■■□□ 2.59
Scaf11E9PZM7 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC31.25■■■□□ 2.59
Scaf11E9PZM7 Gm7199-201ENSMUST00000118327 1485 ntBASIC31.25■■■□□ 2.59
Scaf11E9PZM7 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC31.25■■■□□ 2.59
Scaf11E9PZM7 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC31.25■■■□□ 2.59
Scaf11E9PZM7 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC31.24■■■□□ 2.59
Scaf11E9PZM7 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC31.24■■■□□ 2.59
Scaf11E9PZM7 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC31.24■■■□□ 2.59
Scaf11E9PZM7 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC31.23■■■□□ 2.59
Scaf11E9PZM7 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC31.23■■■□□ 2.59
Scaf11E9PZM7 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC31.23■■■□□ 2.59
Scaf11E9PZM7 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC31.22■■■□□ 2.59
Scaf11E9PZM7 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC31.22■■■□□ 2.59
Scaf11E9PZM7 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC31.22■■■□□ 2.59
Scaf11E9PZM7 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC31.22■■■□□ 2.59
Scaf11E9PZM7 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC31.21■■■□□ 2.59
Retrieved 100 of 76,532 protein–RNA pairs in 19.3 ms