Protein–RNA interactions for Protein: E9PX29

Sptbn4, Spectrin beta chain, mousemouse

Predictions only

Length 2,561 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sptbn4E9PX29 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
Sptbn4E9PX29 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Sptbn4E9PX29 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Sptbn4E9PX29 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Sptbn4E9PX29 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Sptbn4E9PX29 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Sptbn4E9PX29 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Sptbn4E9PX29 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Sptbn4E9PX29 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Sptbn4E9PX29 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Sptbn4E9PX29 Gm27011-201ENSMUST00000182352 972 ntBASIC20.47■□□□□ 0.87
Sptbn4E9PX29 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Sptbn4E9PX29 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC20.47■□□□□ 0.87
Sptbn4E9PX29 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Sptbn4E9PX29 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Sptbn4E9PX29 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Sptbn4E9PX29 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC20.46■□□□□ 0.87
Sptbn4E9PX29 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Sptbn4E9PX29 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
Sptbn4E9PX29 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC20.46■□□□□ 0.87
Sptbn4E9PX29 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC20.45■□□□□ 0.86
Sptbn4E9PX29 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC20.45■□□□□ 0.86
Sptbn4E9PX29 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC20.45■□□□□ 0.86
Sptbn4E9PX29 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Sptbn4E9PX29 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Sptbn4E9PX29 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Sptbn4E9PX29 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Sptbn4E9PX29 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Sptbn4E9PX29 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Sptbn4E9PX29 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Sptbn4E9PX29 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Sptbn4E9PX29 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Sptbn4E9PX29 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Sptbn4E9PX29 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Sptbn4E9PX29 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC20.41■□□□□ 0.86
Sptbn4E9PX29 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Sptbn4E9PX29 Gm28731-201ENSMUST00000185564 1569 ntBASIC20.41■□□□□ 0.86
Sptbn4E9PX29 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Sptbn4E9PX29 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Sptbn4E9PX29 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC20.41■□□□□ 0.86
Sptbn4E9PX29 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Sptbn4E9PX29 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
Sptbn4E9PX29 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Sptbn4E9PX29 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Sptbn4E9PX29 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
Sptbn4E9PX29 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC20.4■□□□□ 0.86
Sptbn4E9PX29 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
Sptbn4E9PX29 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Sptbn4E9PX29 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
Sptbn4E9PX29 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Sptbn4E9PX29 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC20.4■□□□□ 0.86
Sptbn4E9PX29 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Sptbn4E9PX29 Gm5874-201ENSMUST00000096101 508 ntBASIC20.39■□□□□ 0.85
Sptbn4E9PX29 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Sptbn4E9PX29 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Sptbn4E9PX29 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Sptbn4E9PX29 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Sptbn4E9PX29 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Sptbn4E9PX29 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Sptbn4E9PX29 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC20.38■□□□□ 0.85
Sptbn4E9PX29 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC20.38■□□□□ 0.85
Sptbn4E9PX29 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Sptbn4E9PX29 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Sptbn4E9PX29 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC20.38■□□□□ 0.85
Sptbn4E9PX29 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Sptbn4E9PX29 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Sptbn4E9PX29 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC20.37■□□□□ 0.85
Sptbn4E9PX29 Gm40881-201ENSMUST00000223397 166 ntBASIC20.37■□□□□ 0.85
Sptbn4E9PX29 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Sptbn4E9PX29 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Sptbn4E9PX29 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Sptbn4E9PX29 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Sptbn4E9PX29 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC20.36■□□□□ 0.85
Sptbn4E9PX29 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
Sptbn4E9PX29 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC20.35■□□□□ 0.85
Sptbn4E9PX29 Gm6139-201ENSMUST00000079261 882 ntBASIC20.35■□□□□ 0.85
Sptbn4E9PX29 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Sptbn4E9PX29 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC20.34■□□□□ 0.85
Sptbn4E9PX29 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Sptbn4E9PX29 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC20.34■□□□□ 0.85
Sptbn4E9PX29 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Sptbn4E9PX29 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Sptbn4E9PX29 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Sptbn4E9PX29 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Sptbn4E9PX29 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC20.33■□□□□ 0.85
Sptbn4E9PX29 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.85
Sptbn4E9PX29 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC20.33■□□□□ 0.84
Sptbn4E9PX29 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC20.33■□□□□ 0.84
Sptbn4E9PX29 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Sptbn4E9PX29 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Sptbn4E9PX29 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC20.32■□□□□ 0.84
Sptbn4E9PX29 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC20.32■□□□□ 0.84
Sptbn4E9PX29 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Sptbn4E9PX29 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC20.31■□□□□ 0.84
Sptbn4E9PX29 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Sptbn4E9PX29 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Sptbn4E9PX29 Gm28536-201ENSMUST00000190971 1317 ntBASIC20.31■□□□□ 0.84
Sptbn4E9PX29 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC20.31■□□□□ 0.84
Sptbn4E9PX29 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC20.31■□□□□ 0.84
Sptbn4E9PX29 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Retrieved 100 of 76,532 protein–RNA pairs in 152.6 ms