Protein–RNA interactions for Protein: A7VMS2

Gm11127, MHC classIb T15, mousemouse

Predictions only

Length 374 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm11127A7VMS2 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
Gm11127A7VMS2 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
Gm11127A7VMS2 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Gm11127A7VMS2 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Gm11127A7VMS2 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Gm11127A7VMS2 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
Gm11127A7VMS2 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Gm11127A7VMS2 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Gm11127A7VMS2 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Gm11127A7VMS2 Gm8503-201ENSMUST00000118131 455 ntBASIC19.3■□□□□ 0.68
Gm11127A7VMS2 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC19.3■□□□□ 0.68
Gm11127A7VMS2 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Gm11127A7VMS2 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC19.3■□□□□ 0.68
Gm11127A7VMS2 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Gm11127A7VMS2 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
Gm11127A7VMS2 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
Gm11127A7VMS2 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Gm11127A7VMS2 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
Gm11127A7VMS2 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
Gm11127A7VMS2 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Gm11127A7VMS2 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC19.29■□□□□ 0.68
Gm11127A7VMS2 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
Gm11127A7VMS2 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Gm11127A7VMS2 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Gm11127A7VMS2 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Gm11127A7VMS2 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Gm11127A7VMS2 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Gm11127A7VMS2 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Gm11127A7VMS2 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC19.27■□□□□ 0.67
Gm11127A7VMS2 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Gm11127A7VMS2 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.67
Gm11127A7VMS2 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
Gm11127A7VMS2 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Gm11127A7VMS2 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
Gm11127A7VMS2 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Gm11127A7VMS2 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Gm11127A7VMS2 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Gm11127A7VMS2 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Gm11127A7VMS2 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Gm11127A7VMS2 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
Gm11127A7VMS2 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC19.25■□□□□ 0.67
Gm11127A7VMS2 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Gm11127A7VMS2 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Gm11127A7VMS2 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Gm11127A7VMS2 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Gm11127A7VMS2 Gm4419-202ENSMUST00000226239 1431 ntBASIC19.25■□□□□ 0.67
Gm11127A7VMS2 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Gm11127A7VMS2 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Gm11127A7VMS2 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC19.24■□□□□ 0.67
Gm11127A7VMS2 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Gm11127A7VMS2 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
Gm11127A7VMS2 Hsf1-207ENSMUST00000228371 2102 ntBASIC19.24■□□□□ 0.67
Gm11127A7VMS2 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Gm11127A7VMS2 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Gm11127A7VMS2 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC19.23■□□□□ 0.67
Gm11127A7VMS2 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Gm11127A7VMS2 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Gm11127A7VMS2 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Gm11127A7VMS2 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC19.23■□□□□ 0.67
Gm11127A7VMS2 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
Gm11127A7VMS2 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Gm11127A7VMS2 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Gm11127A7VMS2 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
Gm11127A7VMS2 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Gm11127A7VMS2 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
Gm11127A7VMS2 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Gm11127A7VMS2 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Gm11127A7VMS2 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Gm11127A7VMS2 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Gm11127A7VMS2 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Gm11127A7VMS2 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Gm11127A7VMS2 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Gm11127A7VMS2 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Gm11127A7VMS2 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Gm11127A7VMS2 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
Gm11127A7VMS2 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Gm11127A7VMS2 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Gm11127A7VMS2 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Gm11127A7VMS2 AC124392.1-201ENSMUST00000225172 5324 ntBASIC19.19■□□□□ 0.66
Gm11127A7VMS2 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Gm11127A7VMS2 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC19.19■□□□□ 0.66
Gm11127A7VMS2 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC19.19■□□□□ 0.66
Gm11127A7VMS2 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Gm11127A7VMS2 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Gm11127A7VMS2 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Gm11127A7VMS2 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC19.18■□□□□ 0.66
Gm11127A7VMS2 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Gm11127A7VMS2 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Gm11127A7VMS2 AC131739.1-201ENSMUST00000221692 1245 ntBASIC19.18■□□□□ 0.66
Gm11127A7VMS2 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Gm11127A7VMS2 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Gm11127A7VMS2 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Gm11127A7VMS2 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Gm11127A7VMS2 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Gm11127A7VMS2 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC19.17■□□□□ 0.66
Gm11127A7VMS2 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC19.17■□□□□ 0.66
Gm11127A7VMS2 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Gm11127A7VMS2 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Gm11127A7VMS2 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Gm11127A7VMS2 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 58.7 ms