Protein–RNA interactions for Protein: A0A1B0GSS6

Gm3854, Predicted gene 3854, mousemouse

Predictions only

Length 495 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3854A0A1B0GSS6 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC22.14■■□□□ 1.13
Gm3854A0A1B0GSS6 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
Gm3854A0A1B0GSS6 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
Gm3854A0A1B0GSS6 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
Gm3854A0A1B0GSS6 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
Gm3854A0A1B0GSS6 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Gm3854A0A1B0GSS6 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC22.13■■□□□ 1.13
Gm3854A0A1B0GSS6 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC22.13■■□□□ 1.13
Gm3854A0A1B0GSS6 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
Gm3854A0A1B0GSS6 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Gm3854A0A1B0GSS6 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
Gm3854A0A1B0GSS6 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC22.12■■□□□ 1.13
Gm3854A0A1B0GSS6 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Gm3854A0A1B0GSS6 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC22.11■■□□□ 1.13
Gm3854A0A1B0GSS6 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Gm3854A0A1B0GSS6 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Gm3854A0A1B0GSS6 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Gm3854A0A1B0GSS6 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Gm3854A0A1B0GSS6 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC22.1■■□□□ 1.13
Gm3854A0A1B0GSS6 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Gm3854A0A1B0GSS6 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC22.1■■□□□ 1.13
Gm3854A0A1B0GSS6 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Gm3854A0A1B0GSS6 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
Gm3854A0A1B0GSS6 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
Gm3854A0A1B0GSS6 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC22.08■■□□□ 1.13
Gm3854A0A1B0GSS6 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC22.08■■□□□ 1.13
Gm3854A0A1B0GSS6 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
Gm3854A0A1B0GSS6 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC22.08■■□□□ 1.12
Gm3854A0A1B0GSS6 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Gm3854A0A1B0GSS6 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC22.07■■□□□ 1.12
Gm3854A0A1B0GSS6 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
Gm3854A0A1B0GSS6 Gm16464-201ENSMUST00000117815 1095 ntBASIC22.07■■□□□ 1.12
Gm3854A0A1B0GSS6 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC22.07■■□□□ 1.12
Gm3854A0A1B0GSS6 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC22.07■■□□□ 1.12
Gm3854A0A1B0GSS6 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Gm3854A0A1B0GSS6 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC22.06■■□□□ 1.12
Gm3854A0A1B0GSS6 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC22.06■■□□□ 1.12
Gm3854A0A1B0GSS6 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC22.06■■□□□ 1.12
Gm3854A0A1B0GSS6 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC22.06■■□□□ 1.12
Gm3854A0A1B0GSS6 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Gm3854A0A1B0GSS6 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC22.06■■□□□ 1.12
Gm3854A0A1B0GSS6 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Gm3854A0A1B0GSS6 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
Gm3854A0A1B0GSS6 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC22.05■■□□□ 1.12
Gm3854A0A1B0GSS6 Gm5131-201ENSMUST00000212776 1238 ntBASIC22.05■■□□□ 1.12
Gm3854A0A1B0GSS6 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC22.05■■□□□ 1.12
Gm3854A0A1B0GSS6 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC22.05■■□□□ 1.12
Gm3854A0A1B0GSS6 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Gm3854A0A1B0GSS6 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC22.04■■□□□ 1.12
Gm3854A0A1B0GSS6 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Gm3854A0A1B0GSS6 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Gm3854A0A1B0GSS6 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC22.04■■□□□ 1.12
Gm3854A0A1B0GSS6 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Gm3854A0A1B0GSS6 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
Gm3854A0A1B0GSS6 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC22.04■■□□□ 1.12
Gm3854A0A1B0GSS6 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Gm3854A0A1B0GSS6 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC22.03■■□□□ 1.12
Gm3854A0A1B0GSS6 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Gm3854A0A1B0GSS6 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Gm3854A0A1B0GSS6 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Gm3854A0A1B0GSS6 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC22.03■■□□□ 1.12
Gm3854A0A1B0GSS6 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
Gm3854A0A1B0GSS6 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC22.02■■□□□ 1.12
Gm3854A0A1B0GSS6 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC22.02■■□□□ 1.12
Gm3854A0A1B0GSS6 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC22.02■■□□□ 1.12
Gm3854A0A1B0GSS6 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Gm3854A0A1B0GSS6 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC22.02■■□□□ 1.12
Gm3854A0A1B0GSS6 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC22.02■■□□□ 1.12
Gm3854A0A1B0GSS6 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC22.02■■□□□ 1.11
Gm3854A0A1B0GSS6 AC153524.1-201ENSMUST00000220436 1935 ntBASIC22.02■■□□□ 1.11
Gm3854A0A1B0GSS6 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC22.02■■□□□ 1.11
Gm3854A0A1B0GSS6 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Gm3854A0A1B0GSS6 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Gm3854A0A1B0GSS6 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
Gm3854A0A1B0GSS6 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC22■■□□□ 1.11
Gm3854A0A1B0GSS6 Gm7417-201ENSMUST00000192950 473 ntBASIC22■■□□□ 1.11
Gm3854A0A1B0GSS6 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC22■■□□□ 1.11
Gm3854A0A1B0GSS6 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Gm3854A0A1B0GSS6 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC22■■□□□ 1.11
Gm3854A0A1B0GSS6 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Gm3854A0A1B0GSS6 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Gm3854A0A1B0GSS6 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC21.99■■□□□ 1.11
Gm3854A0A1B0GSS6 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC21.99■■□□□ 1.11
Gm3854A0A1B0GSS6 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC21.99■■□□□ 1.11
Gm3854A0A1B0GSS6 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC21.98■■□□□ 1.11
Gm3854A0A1B0GSS6 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC21.98■■□□□ 1.11
Gm3854A0A1B0GSS6 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Gm3854A0A1B0GSS6 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC21.98■■□□□ 1.11
Gm3854A0A1B0GSS6 Gm28536-201ENSMUST00000190971 1317 ntBASIC21.98■■□□□ 1.11
Gm3854A0A1B0GSS6 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Gm3854A0A1B0GSS6 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC21.97■■□□□ 1.11
Gm3854A0A1B0GSS6 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC21.97■■□□□ 1.11
Gm3854A0A1B0GSS6 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Gm3854A0A1B0GSS6 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC21.97■■□□□ 1.11
Gm3854A0A1B0GSS6 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC21.97■■□□□ 1.11
Gm3854A0A1B0GSS6 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC21.97■■□□□ 1.11
Gm3854A0A1B0GSS6 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Gm3854A0A1B0GSS6 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Gm3854A0A1B0GSS6 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Gm3854A0A1B0GSS6 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Retrieved 100 of 76,532 protein–RNA pairs in 22.2 ms